Construct: ORF ccsbBroad304_13412

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004814.1_s304c1, BRDN0000400826
Derived from:
ccsbBroadEn_13412
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM124A (220108)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13412
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220108 FAM124A family with sequence simila... NM_001242312.2 100% 100%
2 human 220108 FAM124A family with sequence simila... NM_145019.4 93.8% 93.6% 101_208del
3 human 220108 FAM124A family with sequence simila... XM_017020419.2 53.6% 51.1% (many diffs)
4 human 220108 FAM124A family with sequence simila... NM_001330522.1 53.3% 52% (many diffs)
5 human 220108 FAM124A family with sequence simila... XM_011534978.2 50.3% 47.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1704
ORF length:
1638
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga cccaaaggcg ggcggcggcg gcgaggagga cgactgcgtg gactcgggcg
121ccgagaccgg agggtccgac tacagccacc tgtcctccac gagcagtgag ctttccgttg
181aagaggcgca ggaccctttc ctggtcagca tccacataat cgcagaccca ggggagtccc
241agcccctgca ggaggccatc gacaacgtcc tggcgtggat ccaccccgac ctcccgctgt
301tccgggtgtc cgagaggcgg gcgtcccggc ggcggcggaa gccccccaag ggcgctcagc
361cagcgctggc tgtggtgctg ttcctgcagg aggagtacgg cgaagagcag atcctgcagc
421tgcaccgcac actgcagcag ccgccctggc gccaccacca caccgagcag gtgcacggcc
481ggttcctgcc ctacctgccc tgcagccagg acttcttcac gctggcccct gggacgccgc
541tttgggccat ccggcccgtg cactacggca aggaaatcgt gcgcttcacc gtctactgtc
601gctacgacaa ctatgctgac agcctcaggt tctaccagct gattctccgg aggagcccca
661gccagaagaa agcggacttc tgcatcttcc ctattttttc caacctggat gtggacatcc
721agttctccct gaaaagactg ccctgtgacc agtgcccggt gcccaccgac tcctccgtgc
781tggagttccg agtgagggac ataggcgagc tcgtgcctct cctgcccaac ccttgcagcc
841ccatcagcga ggggcgctgg cagacggagg accatgatgg gaacaagatc ctcctacagg
901cacaaagggt gcataagaag tttcctaaac ctggcagagt acatcatgcc tccgagaaga
961aacgtcattc cactcctttg ccgagcactg ctgtaccaag ccatacacct ggcagcagcc
1021agcagtcccc gctcaacagt cctcacccgg ggcccatccg gacaggcctg cctcctgggc
1081accagcagga atttgccgga cgagccaaca gcacccccaa ccctccctgg tctttccaga
1141gaagcaagtc cttgttttgt ttgcccacgg gaggcccctc cctggcctcc tcagctgaac
1201cacagtggtt ttcaaacaca ggtgccccag ggcacagggc atcagagtgg aggcatggcc
1261acctcctctc catcgatgac ctagaggggg cccaggagac agacgtggac acaggcctgc
1321ggctgtcctc atcggacctg tctgtggtct ctgcatattc tgcacccagt aggttctgca
1381gcacagtgga gacacccctc ccctccgaaa gatgcagcag ccactgggca gctcacaagg
1441attccaggga gggaccactg cccactgtca gcagggtgac cacagaggcc tcctgggctt
1501ccctcccttt cttcaccaaa aggtcttcca gctcctcagc gacagctcgt gctgctcccc
1561cagctcccag cacctccacc ctcacagact cctccccaca gctcccatgc gataccccca
1621aagtcaagca gactgatgga gacatgccac cacccccagg gtcggctggc cccggggata
1681acgacatgga ggaattctac atctgcccaa ctttcttgta caaagtggtt ggtaagccta
1741tccctaaccc tctcctcggt ctcgattcta cgtagtaatg agctagcgct aaccggtggc
1801gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)