Construct: ORF ccsbBroad304_13460

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000507.1_s304c1, BRDN0000404212
Derived from:
ccsbBroadEn_13460
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NAALADL2 (254827)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13460
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_011512617.3 50.3% 47.7% (many diffs)
2 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006082.2 45.3% 42.9% (many diffs)
3 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006081.2 40.8% 38.7% (many diffs)
4 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_011512615.3 40.7% 38.7% (many diffs)
5 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_006713560.3 39.6% 37.6% (many diffs)
6 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006070.2 39.6% 37.6% (many diffs)
7 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006071.2 39.6% 37.6% (many diffs)
8 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006072.2 39.6% 37.6% (many diffs)
9 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006073.2 39.6% 37.6% (many diffs)
10 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006074.2 39.6% 37.6% (many diffs)
11 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006075.2 39.6% 37.6% (many diffs)
12 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006076.2 39.6% 37.6% (many diffs)
13 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006077.2 39.6% 37.6% (many diffs)
14 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006078.2 39.6% 37.6% (many diffs)
15 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006079.2 39.6% 37.6% (many diffs)
16 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006080.2 39.6% 37.6% (many diffs)
17 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_011512613.2 39.1% 37.2% (many diffs)
18 human 254827 NAALADL2 N-acetylated alpha-linked a... NM_207015.3 38.8% 36.8% (many diffs)
19 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_011512612.3 38.3% 36.4% (many diffs)
20 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_011512616.3 19.5% 17.5% (many diffs)
21 human 254827 NAALADL2 N-acetylated alpha-linked a... XM_017006083.2 17.2% 15.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1026
ORF length:
960
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ctatcagaag gtccatgcag atcaaagagc tccaggacac tcacagtact
121tagacaatga tgaccttcaa gccactgccc ttgacttaga gtgggacatg gagaaggaac
181tagaggagtc tggttttgac caattccagc tagacagtgc tgagaatcag aacctagggc
241attcagagac tatagacctc aatcttgatt ccattcaacc agcaacttca cccaaaggaa
301ggttccagag acttcaagaa gaatctgact acattaccca ttatacacga tctgcaccaa
361agagcaatcg ctgcaacttt tgccacgtct taaaaatgct ttgcacagcc accattttat
421ttatttttgg gattttgata ggttattatg tacatacaaa ttgcccttca gatgctccat
481cttcaggaac agttgatcct cagttatatc aagagattct caagacaatc caggcagaag
541atattaagaa gtctttcaga aatttggtac aactatataa aaatgaagat gacatggaaa
601tttcaaagaa gattaagact cagtggacct ctttgggcct agaagatgta cagtttgtaa
661attactctgt gctgcttgat ctgccaggcc cttctcccag cactgtgact ctgagcagca
721gtggtcaatg ctttcatcct aatggccagc cttgcagtga agaagccaga aaagatagca
781gccaagacct gctctattca tatgcagcct attctgccaa aggaactctc aaggctgaag
841tcatcgatgt gagttatgga atggcagatg atttaaaaag gattaggaaa ataaaaaacg
901taacaaatca gatcgcactc ctgaaattag gaaaattgcc actgctttat aaggttggtc
961cagtgaatgt tattcagtgg tttggtcaat attttgcctt gttttgttgg aattatatgc
1021ttttgtgccc aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg
1081gtctcgattc tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca
1141acctctggat ta

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