Construct: ORF ccsbBroad304_13561

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010259.1_s304c1, BRDN0000411135
Derived from:
ccsbBroadEn_13561
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
XKR6 (286046)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13561
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 286046 XKR6 XK related 6 NM_173683.4 56.4% 56.4% 1_837del
2 human 286046 XKR6 XK related 6 XM_024447129.1 53.7% 53.7% 1_837del;962_1060del
3 mouse 219149 Xkr6 X-linked Kx blood group rel... XM_006518881.3 87.7% 90% (many diffs)
4 mouse 219149 Xkr6 X-linked Kx blood group rel... XM_006518880.3 81.5% 83.6% (many diffs)
5 mouse 219149 Xkr6 X-linked Kx blood group rel... XM_017315977.1 79.6% 81.7% (many diffs)
6 mouse 219149 Xkr6 X-linked Kx blood group rel... NM_173393.2 52.5% 53.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1152
ORF length:
1086
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat gtatgaatat gcagacgtca acatgctgcg cctcctggag accttcctgg
121agagcgcgcc ccaactggtg ctacagctct acatcatgct ccagaagaac agcgccgaga
181ccctgccctg tgtctcctct gtgacttccc tgatgtccct ggcttgggtg ctagcctcct
241atcacaagct gctgcgggac tccagggacg acaagaagag catgagctac agaggggcca
301tcatccaggt cttctggcgc ctcttcacca tctcatcccg agtgatctct tttgccctct
361ttgcttccat cttccagctc tattttggga tcttcgtggt ggttcactgg tgcgccatgg
421ccttctggat catccatggc ggaacagact tctgcatgtc caagtgggag gagatcctct
481tcaacatggt ggtagggatc gtgtacattt tctgctggtt taacgtcaag gaagggcgga
541ctcgatatcg aatgtttgca tattatacga tagtcttgac cgagaatgct gccttgacgt
601tcctttggta tttttacaga gacccggaga ccactgactc ctatgcggtg ccagcactgt
661gttgtgtctt tattagcttt gtggctggga tcgcaatgat gctcttatac tatggcgtgc
721tgcatcccac aggaccacga gctaagatcc ttgccagctc ctgttgtgcc gagctgctct
781ggggcatccc tttgcccccc gatgttgagc ccatggcgcc tgagatccct gggtaccggg
841ggacccaggt tacgcccacc agagccgtaa cggaacaaca ggaggatctc acggctgaca
901cttgcttgcc tgttttccaa gtgagaccca tggggccccc taccccgttg gggcgtcctt
961acctcccaga agggcccctc attaagattg acatgccaag aaagcgatac ccagcttggg
1021atgctcattt tgtagacagg aggctgagaa ggactattaa cattctacaa tatgtcaccc
1081ccaccgcagt aggcattcga tatcgagacg gaccactcct ctatgagttg ctacagtatg
1141agtcttcact ctacccaact ttcttgtaca aagtggttgg taagcctatc cctaaccctc
1201tcctcggtct cgattctacg tagtaatgag ctagcgctaa ccggtggcgc gttaagtcga
1261caatcaacct ctggatta

Download FASTA (ORF) (Full)