Construct: ORF ccsbBroad304_13722

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017238.1_s304c1, BRDN0000411345
Derived from:
ccsbBroadEn_13722
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPS14P3 (644068)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13722
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6208 RPS14 ribosomal protein S14 NM_001025070.2 84.5% 76.1% (many diffs)
2 human 6208 RPS14 ribosomal protein S14 NM_001025071.2 84.5% 76.1% (many diffs)
3 human 6208 RPS14 ribosomal protein S14 NM_005617.4 84.5% 76.1% (many diffs)
4 human 644068 RPS14P3 ribosomal protein S14 pseud... NR_077246.1 59.7% 1_307del;818_853del
5 mouse 102634709 LOC102634709 40S ribosomal protein S14 XR_001781586.1 79.6% (many diffs)
6 mouse 20044 Rps14 ribosomal protein S14 NM_020600.4 78.8% 76.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
576
ORF length:
510
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc acctggaaag gggaaggaaa agaaggaaga acaggtcatc aacctcggac
121ctcaggtggc tgaaggggag aatgtatttg gtgtctgcca tatctttgca tccttcaatg
181acacttttgt ccatgtcacg gatctttctg gcaaacaaac catctgccgt gtgactggtg
241ggatgaaggt gaaggcagac cgagatgaat cctcgccata tgctgctatg ttgaccaccc
301aggatgtggc ccagaggtgc aaggagctgg gtatcattgc cctacacatc caactccggg
361ccacaggagg aaataggacc aagacccttg gacctggggc ccagtcggcc ctcagagccc
421ttgcctgctc gggtatgaag atcgggagga ttgaggacgt cacccccatc ccctctgaca
481gcactctcag gaagggggtc accgtggtcg ccgtctgtga acaagattcc tcaaaatatt
541ttctgttaat aaattgcctt catgtaaaaa ataaataccc aactttcttg tacaaagtgg
601ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
661ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)

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