Construct: ORF ccsbBroad304_13862
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF009213.1_s304c1, BRDN0000407338
- Derived from:
- ccsbBroadEn_13862
- DNA Barcode:
- None
- Epitope Tag:
- V5 (not translated due to frame shift)
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GNG7 (2788)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_13862
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2788 | GNG7 | G protein subunit gamma 7 | NM_052847.3 | 99.5% | 87.1% | 183delC |
| 2 | human | 2788 | GNG7 | G protein subunit gamma 7 | XM_017026606.1 | 99.5% | 87.1% | 183delC |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 270
- ORF length:
- 204
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcatgtc agccactaac aacatagccc aggcccggaa gctggtggaa cagctacgca 121 tagaagccgg gattgagcgc atcaaggtct ccaaagcggc gtctgacctc atgagctact 181 gtgagcaaca tgcccggaac gaccccctgc tggtcggagt ccctgcctcg gagaacccct 241 ttaaggaaag aaaccttgta ttattttata cccaactttc ttgtacaaag tggttggtaa 301 gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta gcgctaaccg 361 gtggcgcgtt aagtcgacaa tcaacctctg gatta