Construct: ORF ccsbBroad304_13954

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013450.1_s304c1, BRDN0000403743
Derived from:
ccsbBroadEn_13954
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC4A2 (6522)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13954
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6522 SLC4A2 solute carrier family 4 mem... NM_001199694.2 93.6% 92.7% (many diffs)
2 human 6522 SLC4A2 solute carrier family 4 mem... NM_001199692.2 93.3% 93.3% 58_303del;1071T>C;2202G>A
3 human 6522 SLC4A2 solute carrier family 4 mem... NM_003040.4 93.3% 93.3% 58_303del;1071T>C;2202G>A
4 human 6522 SLC4A2 solute carrier family 4 mem... NM_001199693.1 93.2% 92.3% (many diffs)
5 human 6522 SLC4A2 solute carrier family 4 mem... XM_006716094.3 47% 46.4% (many diffs)
6 mouse 20535 Slc4a2 solute carrier family 4 (an... XM_006535656.3 81.6% 87.3% (many diffs)
7 mouse 20535 Slc4a2 solute carrier family 4 (an... NM_001253892.1 81.5% 87.7% (many diffs)
8 mouse 20535 Slc4a2 solute carrier family 4 (an... NM_009207.3 81.5% 87.7% (many diffs)
9 mouse 20535 Slc4a2 solute carrier family 4 (an... XM_006535650.1 81.5% 87.7% (many diffs)
10 mouse 20535 Slc4a2 solute carrier family 4 (an... XM_006535651.3 81.5% 87.7% (many diffs)
11 mouse 20535 Slc4a2 solute carrier family 4 (an... XM_006535655.3 81.3% 86.9% (many diffs)
12 mouse 20535 Slc4a2 solute carrier family 4 (an... XM_006535653.1 81.2% 87.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3543
ORF length:
3477
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgag cagcgcccct cggcgccccg ccaagggcgc agattctttc tgtacgccag
121agccaggacg gaagcctcga aggcgcccgg gagcctcccc gactggagaa accccgacca
181ttgaggaggg ggaggaagat gaggatgagg ccagcgaggc tgagggggcc cgggctctca
241ctcagccgtc ccctgtctcc acaccctcct cggtgcagtt ctttctccaa gaggatgaca
301gtgctgaccg gaaggcagag aggaccagtc catcttcccc tgcaccactg ccccaccagg
361aggcgactcc tcgggcctcc aaaggggccc aggctggaac ccaggtggag gaggcggagg
421cggaggcggt ggcggtggcc agtggcactg cagggggtga cgacgggggt gcctcggggc
481gccccctgcc caaagcccag cctgggcacc gcagctacaa ccttcaggag aggaggcgca
541tcgggagcat gactggggct gagcaggcac tgctgccccg ggtccccacg gatgagattg
601aggcccagac gctggccacg gccgacctag acctcatgaa gagtcaccgg tttgaggacg
661ttcctggggt gcggcggcac ttggtgcgga agaatgccaa aggttccaca cagagtggcc
721gagaagggcg ggagcctggc cccacacctc gggcccgacc ccgggccccc cacaagcccc
781atgaggtgtt tgtggagctg aatgagttgc tcctggacaa aaaccaggag ccccagtggc
841gggagacagc tcgctggatc aaatttgaag aggacgtgga ggaggagacc gagcgctggg
901ggaagcccca cgtggcctcc ctctccttcc gcagtctcct ggagctccgc aggaccctgg
961cccatggggc tgtgctcttg gatctggacc agcagaccct gcccggagtg gcccaccagg
1021tggtggagca gatggtcatc tctgaccaga tcaaggccga ggacagggcc aacgtgctgc
1081gggctctgct gttgaaacac agccacccaa gtgatgagaa ggacttctcc ttcccccgca
1141acatctcagc tggctccctg ggctccctgc tggggcatca ccatggtcag ggggctgaga
1201gtgaccccca cgtcaccgag cctctcatgg gaggtgttcc tgagacccgg ctggaggtgg
1261agcgagagcg tgagctgccg cctccagcac caccagctgg catcacccgc tccaagtcca
1321agcacgagct gaaactgctg gagaagattc ctgagaatgc cgaggccacg gtggtccttg
1381tgggctgcgt ggagttcctc tcccgcccca ccatggcctt tgtgcggctc cgggaggctg
1441tggagttgga cgcagtgttg gaggtgccgg tgcctgtgcg tttcctcttc ctgctgctgg
1501gcccgagtag tgccaacatg gactaccacg agatcggccg ctccatctcc accctcatgt
1561cagacaagca attccacgag gcagcctacc tggctgacga gcgggaggac ctgctgacgg
1621ccatcaacgc cttcctggac tgcagcgtgg tgctgccgcc ttcagaagtg cagggcgagg
1681agctgctgcg ctctgtggcc cacttccagc gccagatgct caagaagcga gaggagcagg
1741gccggctgct acctacaggg gctgggctgg agcccaaatc tgcccaagat aaggcgctcc
1801tgcagatggt agaggcggca ggggcagctg aagatgatcc ccttcggcgg acggggcggc
1861cctttggggg gctgatccga gatgtgcggc gccgctatcc ccactacctg agtgacttcc
1921gagatgcact tgaccctcag tgcctggccg cagtcatctt catctacttt gccgccctgt
1981ctcctgccat cacctttggg gggctgctgg gagagaagac acaggacctg ataggggtgt
2041cggagctgat tatgtccaca gcgctccagg gcgtggtctt ctgcctgctg ggtgcccagc
2101ccctgttggt gatcggcttc tcagggcccc tgctggtctt tgaggaggcc ttcttctcgt
2161tctgtagcag caaccacctg gagtacctgg tgggccgtgt gtggatcggc ttctggctgg
2221tgttcctggc cctgctcatg gtggccctgg aggggagctt cctggtccgc ttcgtctccc
2281gcttcaccca ggagatcttc gccttcttga tctcactcat cttcatctat gagaccttct
2341acaagctggt gaagatcttc caggagcacc ccctgcatgg ctgctcagcc tccaacagct
2401cagaggtgga cggcggtgag aacatgacat gggccggggc aagacccacg ctggggccgg
2461gcaacaggag cttggctggg cagtctgggc aggggaagcc ccggggccag cccaacacgg
2521ccctgctgtc gctggtgctc atggccggca ccttcttcat cgccttcttc ctgcgcaaat
2581tcaagaacag ccggttcttt cctggccgga tccggcgggt gattggggac tttggggtgc
2641ccatcgccat cctcatcatg gtgcttgtgg attacagtat tgaggacacc tatacccaga
2701agctgagcgt tcccagtgga ttctcggtga ctgccccaga aaagaggggc tgggtcatca
2761accccctggg agagaagagc cccttccctg tgtggatgat ggttgccagc ctgctgcccg
2821ccatcctggt cttcattctc atcttcatgg agacacagat caccacgctc atcatctcca
2881agaaggagcg catgctgcag aagggctccg gcttccacct ggacctgctg ctcatcgtgg
2941ccatgggcgg catctgtgcc ctctttggcc tgccctggtt ggctgctgcc actgtccgct
3001ctgtcactca cgccaacgcg ctcactgtca tgagcaaggc tgtggcacct ggggacaagc
3061ccaagattca ggaagtcaag gagcagcggg tgacggggct gctggttgcc ctgcttgtgg
3121gcctctccat agttatcggg gatctgctcc ggcagatccc cctggccgtg ctctttggaa
3181ttttcctgta catgggagtc acctccctta acgggatcca gttctatgag cggctgcatc
3241tgctgctcat gccgcccaaa caccacccag atgtcactta cgtcaagaag gtccggaccc
3301tccgtatgca cctgttcacg gccctgcagc tgctctgcct ggccctgctc tgggccgtca
3361tgtccacagc tgcctccctg gccttcccct tcatcctcat cctcacagtg ccgctccgca
3421tggtggtgct cacccgtatc ttcaccgacc gagagatgaa atgtctggat gctaacgagg
3481cagagccggt gtttgatgag cgggagggtg tggacgagta caatgagatg cccatgcctg
3541tgtacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
3601tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
3661tctggatta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.