Construct: ORF ccsbBroad304_13974

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006521.1_s304c1, BRDN0000403097
Derived from:
ccsbBroadEn_13974
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TYR (7299)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13974
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7299 TYR tyrosinase XM_011542970.2 76.3% 73.9% (many diffs)
2 human 7299 TYR tyrosinase NM_000372.5 68% 65.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1197
ORF length:
1131
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct cctggctctt ttgtactgcc tgctgtggag tttccagacc tccgctggcc
121atttccctag agcctgtgtc tcctctaaga acctgatgga gaaggaatgc tgtccaccgt
181ggagcgggga caggagtccc tgtggccagc tttcaggcag aggttcctgt cagaatatcc
241ttctgtccaa tgcaccactt gggcctcaat ttcccttcac aggggtggat gaccgggagt
301cgtggccttc cgtcttttat aataggacct gccagtgctc tggcaacttc atgggattca
361actgtggaaa ctgcaagttt ggcttttggg gaccaaactg cacagagaga cgactcttgg
421tgagaagaaa catcttcgat ttgagtgccc cagagaagga caaatttttt gcctacctca
481ctttagcaaa gcataccatc agctcagact atgtcatccc catagggacc tatggccaaa
541tgaaaaatgg atcaacaccc atgtttaacg acatcaatat ttatgacctc tttgtctgga
601tgcattatta tgtgtcaatg gatgcactgc ttgggggatc tgaaatctgg agagacattg
661attttgccca tgaagcacca gcttttctgc cttggcatag actcttcttg ttgcggtggg
721aacaagaaat ccagaagctg acaggagatg aaaacttcac tattccatat tgggactggc
781gggatgcaga aaagtgtgac atttgcacag atgagtacat gggaggtcag caccccacaa
841atcctaactt actcagccca gcatcattct tctcctcttg gcagattgtc tgtagccgat
901tggaggagta caacagccat cagtctttat gcaatggaac gcccgaggga cctttacggc
961gtaatcctgg aaaccatgac aaatccagaa ccccaaggct cccctcttca gctgatgtag
1021aattttgcct gagtttgacc caatatgaat ctggttccat ggataaagct gccaatttca
1081gctttagaaa tacactggaa gagatgggat ttctccatgt tggctgggct ggtctcaaac
1141tcctgacctc aagagatcca ccaccttggc ctcccaaaat gctgggatac aggcttgccc
1201aactttcttg tacaaagtgg ttggtaagcc tatccctaac cctctcctcg gtctcgattc
1261tacgtagtaa tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca acctctggat
1321ta

Download FASTA (ORF) (Full)