Construct: ORF ccsbBroad304_14003

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012676.1_s304c1, BRDN0000461495
Derived from:
ccsbBroadEn_14003
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
URI1 (8725)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14003
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8725 URI1 URI1 prefoldin like chaperone XM_011527435.2 97.8% 34.3% (many diffs)
2 human 8725 URI1 URI1 prefoldin like chaperone XM_005259362.2 94.6% 33.2% (many diffs)
3 human 8725 URI1 URI1 prefoldin like chaperone XM_024451751.1 92.4% 29.2% 0_1ins108;436G>T;666_668delTGA
4 human 8725 URI1 URI1 prefoldin like chaperone NM_003796.3 92.2% 32.1% (many diffs)
5 human 8725 URI1 URI1 prefoldin like chaperone NM_001252641.2 85% 36.2% (many diffs)
6 human 8725 URI1 URI1 prefoldin like chaperone XM_005259363.4 82.9% 34.8% (many diffs)
7 human 8725 URI1 URI1 prefoldin like chaperone NR_045557.1 43.2% (many diffs)
8 mouse 19777 Uri1 URI1, prefoldin-like chaperone XM_006539678.3 74.1% 25.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
612
ORF length:
543
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gtggcgcggc tgcgcgagga gcaggaaaag gaagaaggta gataatgact
121ataatgccct tcgagaaaga ctcagcacct tgcctgataa attgtcttat aatataatgg
181taccatttgg cccttttgcc ttcatgccag gaaaacttgt ccatactaat gaagtcactg
241ttttactggg ggacaactgg tttgcaaagt gctcagcaaa gcaggctgta ggtttagttg
301agcaccggaa agaacatgta agaaaaacaa tagatgactt aaaaaaagtg atgaaaaatt
361ttgaatccag agttgaattc acagaagatt tgcagaaaat gagcgatgct gcaggtgata
421ttgttgacat acgagaagaa attaaatgtg acttcgaatt taaagcaaaa caccgaattg
481ctcataaacc gcattccaaa ccaaaaactt cagatatttt tgaagcagat attgcaaatg
541atgtgaaatc caaggatttg ctagctgata aagaactgtg ggctcgactt gaagaactag
601agagacagga ataattgctg ggtgaacttg atagtaagcc tgatactgtg attgcaaatg
661gagaagatac gacatcttct gaagaggaaa aggaagatcg taacacaaat gtgaatgcga
721tgcatcaagt aacagactct catactcctt gtcataagga tgttgcaagt tcagaaccat
781tcagtggtca agtgaatagt cagttgaact gttcagtgaa tggttccagt tcttaccaca
841gtgatgatga tgatgatgat gatgacgacg acgacgacaa cattgacgac gatgatggtg
901ataacgacca tgaggcttta ggggttggag ataattctat accaacaata tatttttcac
961atactgttga gcctaagagg gtccgaataa atactggaaa gaataccact ttaaaattca
1021gtgaaaagaa agaagaagcc aaacgtaaac gaaagaacag cactggcagt ggccactctg
1081cccaggagct gccgaccatc aggacgcctg cagacattta cagagccttt gttgatgttg
1141tgaatggaga atatgtccct cgcaaatcca tcctgaagtc tcgaagtaga gagaatagtg
1201tgtgtagcga cactagtgaa agcagtgctg ctgaatttga tgataggcgg ggagttttga
1261ggagtatcag ctgcgaagaa gccacttgca gtgacaccag tgagagcatt ttggaagagg
1321aaccacaaga aaatcaaaag aaacttttgc ccttatcagt aacacctgag gctttttctg
1381gaactgttat agaaaaagaa tttgtatcac cttccttaac accaccccca gccattgctc
1441atcccgcact acccactatt ccagaacgaa aggaagttct gttggaagca tctgaagaaa
1501ctggaaagag ggtttcaaag tttaaagctg ccagattgca acagaaagac ttgccaactt
1561tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
1621agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)