Construct: ORF ccsbBroad304_14330

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011196.1_s304c1, BRDN0000401565
Derived from:
ccsbBroadEn_14330
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
SERPINB12 (89777)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14330
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89777 SERPINB12 serpin family B member 12 NM_001307928.1 99.9% 22.8% 274_275insN
2 human 89777 SERPINB12 serpin family B member 12 XM_011526248.1 99.9% 22.8% 274_275insN
3 human 89777 SERPINB12 serpin family B member 12 XM_011526249.1 99.9% 22.8% 274_275insN
4 human 89777 SERPINB12 serpin family B member 12 XM_017026067.1 99.9% 22.8% 274_275insN
5 human 89777 SERPINB12 serpin family B member 12 XM_011526246.1 98.3% 22.4% 1_21del;295_296insN
6 human 89777 SERPINB12 serpin family B member 12 XM_005266778.3 97.1% 22.1% 1_36del;310_311insN
7 human 89777 SERPINB12 serpin family B member 12 NM_080474.2 95.2% 20.7% 243_244ins61
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
390
ORF length:
321
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggactctctt gttacagcaa acaccaaatt ttgctttgat ctttttcaag
121agataggcaa agatgatcgt cataaaaaca tatttttctc tcccctgagc ctctcagctg
181cccttggtat ggtacgcttg ggtgctagaa gtgacagtgc acatcagatt gatgaggtac
241tacacttcaa cgaattttcc cagaatgaaa gcaaagaacc tgacccttgt ctgaaaagca
301acaaacaaaa agtgctggct gacagctctc tggaggggca ganaaaaaac gacagagcct
361ctggatcagc aggctgggtc cttaaacaat gagagcggac tggtcagctg ctactttggg
421cagcttctct ccaaattaga caggatcaag actgattaca cactgagtat tgccaacagg
481ctttatggag agcaggaatt cccaatctgt caggaatact tagatggtgt gattcaattt
541taccacacga cgattgaaag tgttgatttc caaaaaaacc ctgaaaaatc cagacaagag
601attaacttct gggttgaatg tcaatcccaa ggtaaaatca aggaactctt cagcaaggac
661gctattaatg ctgagactgt gctggtactg gtgaatgctg tttacttcaa ggccaaatgg
721gaaacatact ttgaccatga aaacacggtg gatgcacctt tctgtctaaa tgcgaatgaa
781aacaagagtg tgaagatgat gacgcaaaaa ggcctctaca gaattggctt catagaggag
841gtgaaggcac agatcctgga aatgaggtac accaagggga agctcagcat gttcgtgctg
901ctgccatctc actctaaaga taacctgaag ggtctggaag agcttgaaag gaaaatcacc
961tatgaaaaaa tggtggcctg gagcagctca gaaaacatgt cagaagaatc ggtggtcctg
1021tccttccccc ggttcaccct ggaagacagc tatgatctca attccatttt acaagacatg
1081ggcattacgg atatctttga tgaaacgagg gctgatctta ctggaatctc tccaagtccc
1141aatttgtact tgtcaaaaat tatccacaaa acctttgtgg aggtggatga aaacggtacc
1201caggcagctg cagccactgg ggctgttgtc tcggaaaggt cactacgatc ttgggtggag
1261tttaatgcca accacccttt tctctttttc attagacaca acaaaaccca aaccattctc
1321ttttatggca gggtctgctc tcctttgcca actttcttgt acaaagtggt tggtaagcct
1381atccctaacc ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg
1441cgcgttaagt cgacaatcaa cctctggatt a

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