Construct: ORF ccsbBroad304_14490

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011740.1_s304c1, BRDN0000460186
Derived from:
ccsbBroadEn_14490
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
TPTEP1 (387590)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14490
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 387590 TPTEP1 TPTE pseudogene 1 NR_001591.1 18.3% (many diffs)
2 human 7179 TPTE transmembrane phosphatase w... NM_199260.3 16.4% 4.3% (many diffs)
3 human 93492 TPTE2 transmembrane phosphoinosit... NM_199254.2 15.7% 3.9% (many diffs)
4 human 7179 TPTE transmembrane phosphatase w... NM_199261.3 15.2% 3.7% (many diffs)
5 human 7179 TPTE transmembrane phosphatase w... NM_199259.3 15.1% 4.1% (many diffs)
6 human 93492 TPTE2 transmembrane phosphoinosit... NR_073485.1 11.1% (many diffs)
7 human 220115 TPTE2P3 transmembrane phosphoinosit... NR_002793.1 8.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
237
ORF length:
168
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggattcacta ccagattcta ctgtatgctc tgacaactat gaccacaatg
121gcagcaagat taagaaaatt gtgcattcaa ttatatcatc ctttgcattt tggactattt
181ggagttttcc tggtcttact ggatgtcact ctcgtccttg ccgacctaat tttcactgac
241agcaaacttt atattccttc ggagtatcgt tctatttctc tagctattgc cttatttttt
301ctcatggatg ttcttcttcg agtatttgta gaagggaaac tgaacttgcc aactttcttg
361tacaaagtgg ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa
421tgagctagcg ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)