Construct: ORF ccsbBroad304_14645

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019037.1_s304c1, BRDN0000459836
Derived from:
ccsbBroadEn_14645
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FLT4 (2324)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14645
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2324 FLT4 fms related tyrosine kinase 4 NM_002020.5 100% 100%
2 human 2324 FLT4 fms related tyrosine kinase 4 NM_001354989.2 99.3% 99.3% 3894_3918delinsG
3 human 2324 FLT4 fms related tyrosine kinase 4 NM_182925.5 95.2% 95.1% 3894_4089delinsG
4 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009266.1 93.8% 92.8% (many diffs)
5 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009267.2 93.8% 92.8% (many diffs)
6 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009268.1 93.2% 93.2% 0_1ins78;3816_4011delinsG
7 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009263.1 91.1% 90% (many diffs)
8 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009264.2 91.1% 90% (many diffs)
9 human 2324 FLT4 fms related tyrosine kinase 4 XM_017009265.1 91.1% 90% (many diffs)
10 human 2324 FLT4 fms related tyrosine kinase 4 XM_011534478.3 89.5% 88.5% (many diffs)
11 human 2324 FLT4 fms related tyrosine kinase 4 XM_011534484.2 83.9% 83.9% 0_1ins459;3435_3630delinsG
12 human 2324 FLT4 fms related tyrosine kinase 4 XR_001742050.2 61.7% (many diffs)
13 mouse 14257 Flt4 FMS-like tyrosine kinase 4 NM_008029.3 81.5% 84.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3963
ORF length:
3894
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcagcggggc gccgcgctgt gcctgcgact gtggctctgc ctgggactcc
121tggacggcct ggtgagtggc tactccatga cccccccgac cttgaacatc acggaggagt
181cacacgtcat cgacaccggt gacagcctgt ccatctcctg caggggacag caccccctcg
241agtgggcttg gccaggagct caggaggcgc cagccaccgg agacaaggac agcgaggaca
301cgggggtggt gcgagactgc gagggcacag acgccaggcc ctactgcaag gtgttgctgc
361tgcacgaggt acatgccaac gacacaggca gctacgtctg ctactacaag tacatcaagg
421cacgcatcga gggcaccacg gccgccagct cctacgtgtt cgtgagagac tttgagcagc
481cattcatcaa caagcctgac acgctcttgg tcaacaggaa ggacgccatg tgggtgccct
541gtctggtgtc catccccggc ctcaatgtca cgctgcgctc gcaaagctcg gtgctgtggc
601cagacgggca ggaggtggtg tgggatgacc ggcggggcat gctcgtgtcc acgccactgc
661tgcacgatgc cctgtacctg cagtgcgaga ccacctgggg agaccaggac ttcctttcca
721accccttcct ggtgcacatc acaggcaacg agctctatga catccagctg ttgcccagga
781agtcgctgga gctgctggta ggggagaagc tggtcctgaa ctgcaccgtg tgggctgagt
841ttaactcagg tgtcaccttt gactgggact acccagggaa gcaggcagag cggggtaagt
901gggtgcccga gcgacgctcc cagcagaccc acacagaact ctccagcatc ctgaccatcc
961acaacgtcag ccagcacgac ctgggctcgt atgtgtgcaa ggccaacaac ggcatccagc
1021gatttcggga gagcaccgag gtcattgtgc atgaaaatcc cttcatcagc gtcgagtggc
1081tcaaaggacc catcctggag gccacggcag gagacgagct ggtgaagctg cccgtgaagc
1141tggcagcgta ccccccgccc gagttccagt ggtacaagga tggaaaggca ctgtccgggc
1201gccacagtcc acatgccctg gtgctcaagg aggtgacaga ggccagcaca ggcacctaca
1261ccctcgccct gtggaactcc gctgctggcc tgaggcgcaa catcagcctg gagctggtgg
1321tgaatgtgcc cccccagata catgagaagg aggcctcctc ccccagcatc tactcgcgtc
1381acagccgcca ggccctcacc tgcacggcct acggggtgcc cctgcctctc agcatccagt
1441ggcactggcg gccctggaca ccctgcaaga tgtttgccca gcgtagtctc cggcggcggc
1501agcagcaaga cctcatgcca cagtgccgtg actggagggc ggtgaccacg caggatgccg
1561tgaaccccat cgagagcctg gacacctgga ccgagtttgt ggagggaaag aataagactg
1621tgagcaagct ggtgatccag aatgccaacg tgtctgccat gtacaagtgt gtggtctcca
1681acaaggtggg ccaggatgag cggctcatct acttctatgt gaccaccatc cccgacggct
1741tcaccatcga atccaagcca tccgaggagc tactagaggg ccagccggtg ctcctgagct
1801gccaagccga cagctacaag tacgagcatc tgcgctggta ccgcctcaac ctgtccacgc
1861tgcacgatgc gcacgggaac ccgcttctgc tcgactgcaa gaacgtgcat ctgttcgcca
1921cccctctggc cgccagcctg gaggaggtgg cacctggggc gcgccacgcc acgctcagcc
1981tgagtatccc ccgcgtcgcg cccgagcacg agggccacta tgtgtgcgaa gtgcaagacc
2041ggcgcagcca tgacaagcac tgccacaaga agtacctgtc ggtgcaggcc ctggaagccc
2101ctcggctcac gcagaacttg accgacctcc tggtgaacgt gagcgactcg ctggagatgc
2161agtgcttggt ggccggagcg cacgcgccca gcatcgtgtg gtacaaagac gagaggctgc
2221tggaggaaaa gtctggagtc gacttggcgg actccaacca gaagctgagc atccagcgcg
2281tgcgcgagga ggatgcggga cgctatctgt gcagcgtgtg caacgccaag ggctgcgtca
2341actcctccgc cagcgtggcc gtggaaggct ccgaggataa gggcagcatg gagatcgtga
2401tccttgtcgg taccggcgtc atcgctgtct tcttctgggt cctcctcctc ctcatcttct
2461gtaacatgag gaggccggcc cacgcagaca tcaagacggg ctacctgtcc atcatcatgg
2521accccgggga ggtgcctctg gaggagcaat gcgaatacct gtcctacgat gccagccagt
2581gggaattccc ccgagagcgg ctgcacctgg ggagagtgct cggctacggc gccttcggga
2641aggtggtgga agcctccgct ttcggcatcc acaagggcag cagctgtgac accgtggccg
2701tgaaaatgct gaaagagggc gccacggcca gcgagcaccg cgcgctgatg tcggagctca
2761agatcctcat tcacatcggc aaccacctca acgtggtcaa cctcctcggg gcgtgcacca
2821agccgcaggg ccccctcatg gtgatcgtgg agttctgcaa gtacggcaac ctctccaact
2881tcctgcgcgc caagcgggac gccttcagcc cctgcgcgga gaagtctccc gagcagcgcg
2941gacgcttccg cgccatggtg gagctcgcca ggctggatcg gaggcggccg gggagcagcg
3001acagggtcct cttcgcgcgg ttctcgaaga ccgagggcgg agcgaggcgg gcttctccag
3061accaagaagc tgaggacctg tggctgagcc cgctgaccat ggaagatctt gtctgctaca
3121gcttccaggt ggccagaggg atggagttcc tggcttcccg aaagtgcatc cacagagacc
3181tggctgctcg gaacattctg ctgtcggaaa gcgacgtggt gaagatctgt gactttggcc
3241ttgcccggga catctacaaa gaccccgact acgtccgcaa gggcagtgcc cggctgcccc
3301tgaagtggat ggcccctgaa agcatcttcg acaaggtgta caccacgcag agtgacgtgt
3361ggtcctttgg ggtgcttctc tgggagatct tctctctggg ggcctccccg taccctgggg
3421tgcagatcaa tgaggagttc tgccagcggc tgagagacgg cacaaggatg agggccccgg
3481agctggccac tcccgccata cgccgcatca tgctgaactg ctggtccgga gaccccaagg
3541cgagacctgc attctcggag ctggtggaga tcctggggga cctgctccag ggcaggggcc
3601tgcaagagga agaggaggtc tgcatggccc cgcgcagctc tcagagctca gaagagggca
3661gcttctcgca ggtgtccacc atggccctac acatcgccca ggctgacgct gaggacagcc
3721cgccaagcct gcagcgccac agcctggccg ccaggtatta caactgggtg tcctttcccg
3781ggtgcctggc cagaggggct gagacccgtg gttcctccag gatgaagaca tttgaggaat
3841tccccatgac cccaacgacc tacaaaggct ctgtggacaa ccagacagac agtgggatgg
3901tgctggcctc ggaggagttt gagcagatag agagcaggca tagacaagaa agcggcttca
3961ggttgccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
4021tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
4081tctggatta

Download FASTA (ORF) (Full)