Construct: ORF ccsbBroad304_14757

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018919.1_s304c1, BRDN0000459403
Derived from:
ccsbBroadEn_14757
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
PIK3C2G (5288)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14757
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5288 PIK3C2G phosphatidylinositol-4-phos... NM_004570.5 99.5% 80.6% (many diffs)
2 human 5288 PIK3C2G phosphatidylinositol-4-phos... NM_001288772.2 96.8% 78.3% (many diffs)
3 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019474.2 96.5% 80.2% (many diffs)
4 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_011520696.2 94.4% 78.9% (many diffs)
5 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019470.1 93.9% 78% (many diffs)
6 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019471.1 93.9% 78% (many diffs)
7 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019472.1 93.9% 78% (many diffs)
8 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019473.2 93.9% 78% (many diffs)
9 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_011520697.2 93.7% 80.7% (many diffs)
10 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019476.1 93.5% 77.2% (many diffs)
11 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019475.1 93.4% 81% (many diffs)
12 human 5288 PIK3C2G phosphatidylinositol-4-phos... NM_001288774.1 82% 63.2% (many diffs)
13 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019477.1 79.3% 62.9% (many diffs)
14 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019479.1 53.5% 37.4% (many diffs)
15 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_011520700.2 53.1% 62.7% (many diffs)
16 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_011520701.2 53.1% 62.7% (many diffs)
17 human 5288 PIK3C2G phosphatidylinositol-4-phos... XM_017019478.2 53.1% 62.7% (many diffs)
18 human 5288 PIK3C2G phosphatidylinositol-4-phos... XR_931307.2 50.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3669
ORF length:
3600
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcatattct tggcaaacgg atccaaatcc taatgaatca cacgaaaagc
121agtatgaaca ccaagaattt ctctttgtaa atcaacccca ttcttctagc caagtcagtc
181tgggttttga tcagatagta gatgagatca gtggcaaaat tccacactac gagagtgaaa
241ttgatgaaaa cacctttttt gtgcccactg caccaaaatg ggactcaaca gggcattcat
301taaatgaagc acaccaaata tccttgaatg aattcacttc taaaagccgt gaactctcct
361ggcatcaagt tagcaaagca ccagcaattg gttttagtcc ttctgtgtta ccaaaacctc
421aaaatacgaa taaagaatgc tcctggggaa gcataggaaa acatcatggt gctgatgatt
481ccagattcag tattttagct ctatcattca caagtttgga taaaattaat ctagagaaag
541aattagaaaa tgaaaatcat aactaccata taggatttga aagtagcatt cctccaacaa
601attcatcctt ctcaagtgac ttcatgccga aagaagagaa taaaaggagt ggacatgtga
661acattgtgga accatctttg atgcttttga aaggctctct tcaacccgga atgtgggaaa
721gtacatggca gaagaatata gagtcaatat gttgttccat tcagctagtg gaagtacctc
781aagcagcata cgagtctggc ctctttttgc acaaagtaaa aaaaatcaga gaaagatatc
841atgcagctga tgttaatttc aattctggga agatctggag cactactaca gcatttccgt
901atcagctctt ttctaagacc aagtttaata tacatatttt tattgataac tcaacacaac
961ctcttcattt tatgccatgt gctaattatc ttgtcaaaga tctaattgca gaaattctgc
1021atttttgcac aaatgaccag ctactcccca aagatcatat tctaagtgta tgtggctctg
1081aagaattttt acaaaacgac cactgtttgg ggagccacaa aatgtttcaa aaagataaat
1141ctgttattca gctccacctg cagaaaagta gggaagctcc aggaaagcta tctcgaaagc
1201atgaagagga ccacagtcag ttttatctga atcaacttct agaatttatg catatttgga
1261aagtatccag acaatgtctc ttaacactca tcagaaaata tgacttccac ctgaaatacc
1321tattgaaaac ccaggaaaac gtgtataata ttattgaaga agttaaaaaa atatgcagtg
1381ttctagggtg tgtggaaacc aaacaaatta cagatgcagt aaatgaacta agtctaattc
1441ttcagagaaa aggagagaat ttttatcaaa gttcagagac ttcagcaaaa ggcttgatag
1501agaaggtaac aactgaacta tccacatcca tctaccagct aatcaatgtc tactgtaaca
1561gcttttatgc agattttcag cctgtaaatg tacctagatg cacttcctat ctaaatcccg
1621ggcttccttc ccacctcagc ttcacagtgt atgcagcaca caacattcca gaaacctggg
1681tgcacaggat caattttccc cttgaaataa agtcacttcc aagggaatcc atgctcactg
1741taaaactgtt tgggattgcc tgtgcaacca acaatgcaaa tttactggcg tggacttgtc
1801ttccactgtt tccaaaagaa aaatccattc tcgggtctat gctgttcagc atgacattac
1861agagtgagcc tcccgtagaa atgataactc caggagtgtg ggatgtaagt cagccatccc
1921cggtgaccct gcagattgat tttccagcta ctgggtggga gtatatgaaa cctgattctg
1981aagagaatag aagtaatctt gaagagccac taaaggagtg tataaaacat attgccagac
2041tttcacagaa acagactccc ctactactct ctgaagaaaa gaaaagatat ttatggtttt
2101atcgcttcta ctgcaataat gaaaactgct cccttccttt agtcctgggt agtgcccctg
2161gatgggatga aaggactgtt tcagaaatgc ataccatttt gagaagatgg acattttctc
2221aacctttaga ggctcttggg cttttgactt ccagttttcc agatcaagaa attcgtaaag
2281tggcagttca acaattagac aacctcttga atgatgaact actggaatat ctcccacagc
2341tagttcaggc tgtcaagttt gaatggaacc ttgagagtcc tttagtgcaa cttctactcc
2401accgctcctt gcagagcatc caggttgccc atcgtcttta ctggctgcta aaaaatgcag
2461aaaatgaagc ttattttaaa agctggtatc agaagctact agctgctctc caattctgtg
2521caggtaaagc cttgaatgat gagttttcca aggagcagaa acttatcaaa attctgggag
2581atattgggga aagagtcaag tctgccagtg accatcaaag acaggaggta ctgaagaaag
2641aaattggcag actagaagag ttctttcaag atgtaaatac ttgtcatctt cctctgaacc
2701ctgccctatg tataaaaggg attgatcacg atgcatgttc atattttaca tctaatgctt
2761tgccattgaa gattactttc atcaatgcta atccgatggg caaaaacatc agcattattt
2821ttaaggctgg agatgatctt cgtcaggata tgcttgttct gcagcttatt caagtgatgg
2881acaatatttg gctgcaggaa ggcttggata tgcaaatgat catttataga tgtctatcca
2941caggaaaaga ccaaggattg gtgcagatgg tacctgatgc tgtgacccta gcaaagattc
3001atcgccattc tggactgata ggaccattga aagaaaatac aattaaaaag tggttcagtc
3061agcacaacca cttaaaggca gattatgaaa aggccttgag gaactttttc tactcctgtg
3121ctggctggtg tgtggtaaca ttcatcctgg gagtatgtga ccgtcacaat gataatatca
3181tgctgacaaa gtcgggccac atgtttcata ttgactttgg aaaattctta ggtcatgcac
3241aaacatttgg agggataaaa agggaccgag ctcctttcat ttttacttca gagatggaat
3301actttattac agagggtggg aaaaacccac agcattttca agattttgtg gaactttgct
3361gtcgtgctta taatattatc agaaagcaca gccaactgct cttgaacctg ctggaaatga
3421tgctgtatgc aggactgcct gagctaagtg gaattcaaga cctgaaatat gtgtataata
3481atcttcgtcc acaagacaca gacctggaag caacaagtca ttttaccaag aaaataaagg
3541aaagtctgga gtgtttccct gttaaattga ataacttgat ccaccccact tgcacaaaag
3601tcaaccataa gccctgccaa atttactcca cagacttttc ttcaagaatc ctgtttgctg
3661agtacaacta ggtcgatgaa aagagcaaca attttagggt tcagcaagaa atccagtaat
3721ctgtatctga tccaggtgac acacagcaac aacgaaacaa gcctgacaga aaaatcattt
3781gagcagtttt caaaacttca cagccaactt cagaagcagt ttgcatcact gactctccca
3841gagtttcctc attggtggca cctacctttt acaaattcag atcacagaag attcagagat
3901ctaaatcatt acatggaaca gatattaaat gtatcacatg aagttacaaa cagtgattgt
3961gtacttagct ttttcctctc tgaggctgtg caacaaacag ttgaagaatc atcacctgtg
4021tacctaggtg agaagtttcc agacaagaag cctaaggtgc agttagtcat atcctacgag
4081gatgtgaagc tgaccatact agtgaaacac atgaaaaaca ttcatctccc agatggctct
4141gcgcccagtg cacatgttga attttatctt ttaccatatc ccagtgaagt tcgtaggagg
4201aaaacaaaat ctgttccaaa atgtacggac cccacttaca atgaaattgt agtatatgat
4261gaagtcacag agctccaagg acatgtctta atgcttattg tgaagagtaa aactgtattt
4321gtgggagcaa ttaacatccg actctgtagt gtcccactcg ataaagaaaa atggtatcca
4381ttaggaaaca gtataatttt gccaactttc ttgtacaaag tggttggtaa gcctatccct
4441aaccctctcc tcggtctcga ttctacgtag taatgagcta gcgctaaccg gtggcgcgtt
4501aagtcgacaa tcaacctctg gatta

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