Construct: ORF ccsbBroad304_15153

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004566.1_s304c1, BRDN0000401509
Derived from:
ccsbBroadEn_15153
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
LONRF3 (79836)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15153
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79836 LONRF3 LON peptidase N-terminal do... NM_001031855.3 99.6% 23.4% (many diffs)
2 human 79836 LONRF3 LON peptidase N-terminal do... NM_024778.5 94.3% 24.7% (many diffs)
3 human 79836 LONRF3 LON peptidase N-terminal do... XM_005262476.2 93.3% 21.9% (many diffs)
4 human 79836 LONRF3 LON peptidase N-terminal do... XM_011531398.2 74.7% 26.8% (many diffs)
5 human 79836 LONRF3 LON peptidase N-terminal do... XM_017029845.1 74.5% 31.2% (many diffs)
6 human 79836 LONRF3 LON peptidase N-terminal do... XR_001755724.2 74.3% (many diffs)
7 human 79836 LONRF3 LON peptidase N-terminal do... NR_110311.1 69.3% (many diffs)
8 human 79836 LONRF3 LON peptidase N-terminal do... NM_001289109.1 55.5% 7% 0_1ins923;15_16delACinsNA;136_291del
9 human 79836 LONRF3 LON peptidase N-terminal do... XR_938554.2 26.8% (many diffs)
10 human 79836 LONRF3 LON peptidase N-terminal do... XR_001755725.1 20.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
672
ORF length:
603
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggagtcagta cggatcgaac agatgctgag cttgcccgcc gaggtcagca
121gcgacaactt ggagtcggcg gagcgagggg catcagcggc ccaagtagac atgggccccc
181acccaaaggt ggctgcagag ggccccgcac ctctaccgac gcgggagcca gagcaagagc
241agtctccggg gacctcaacg ccggagagca aagtcctgct cacgcaggca gacgccttgg
301cgtcccgggg gcgaatccgt gaagccctcg aggtgtatag acagctctcc gagcggcagc
361agctggtggc tgagcagctg gagcagctgg tgcgctgcct ggcggagaaa gtcccgcaag
421gcgaggcgct ggcgccggcg cccccggacg agggtagcac tgcaagcggc accgtggcgg
481cggaagagac ggggggcgcc gcggcggcgg cggccaccga ggtgtgggac ggctttaagt
541gccggaaatg tcatgggttt ctatcagacc ccgttccttg tcgtgtggcc acaccttttg
601taaactgtgc ctggaacgtg ggcgggccgc cgaccggcgc tgtgcgctgt gcggggtcaa
661gctctccgcc ttgatggtgg ccactgggcg ggcgcgtgga gcccggcggg ctgggcagca
721gccgccgccg ccgctgcgag tcaacgtggt gctcagcggc ctcctcggca agttgtttcc
781aggcccagcg cgagcgtcgc aactccggca cgagggcaac cgactgtacc gcgagcgcca
841ggtggaggcg gcactgctca agtacaacga ggcagttaag ttggctccaa atgaccactt
901gctttatagc aaccggtctc agatttattt caccttggag tctcatgaga atgcactgca
961tgatgcagaa atagcatgta agctccgccc gatgggtttt aaggcnaatt tcagaaaagc
1021ccaagcctta gccaccctag gcaaggtgga ggaggcacta agggagtttc tctactgtgt
1081atcccttgat ggaaagaaca agagagcaag atgtgaagcc caaagagaca atctggagct
1141cccacattgt tctagtcagg aggaagcagc agccagggga gatggcagca gtctgatgga
1201cccagctaaa gtgaaggggg atggtcagca gcaccacatg aaagaccagg aagaagagga
1261ggagaagtgg gatgctacct ctccaaaagc tgcttccagc aagactggaa aatgccagga
1321aaagaaaagg aaacattgcc agattgaatc ccaagaagaa acggggatgc ctaataaagc
1381ctccaagcaa gatcctccca ctgatcaggg ggacaaacct gctctcagtt taccacttgc
1441atctttcgac gcatctgacc ttgaatgcgc tctatgtatg agattattct atgagccagt
1501cacaacacct tgcgggcata ctttttgctt aaaatgccta gaaagatgcc tagatcacaa
1561cgcaaagtgt ccattgtgca aagacggtct ttcacagtgc ttggcatcaa gaaaatacag
1621caaaaatgta ataatggagg agctcatagc taaattcctt ccagaagaac tgaaggaacg
1681aaggaagctt tatgaagagg aaatggaaga actttctaac cttaataaga atgtgcctat
1741tttcgtgtgt actatggcct atcccaccgt tccttgtccc ctgcacatct ttgagccttg
1801ttaccgcctg atgattcgta gatgcattga gacaggcacg agacagtttg gcatgtgcct
1861tggagatcct gtcaaagggt ttgcagaata tggctgcatc ctagagatca gaaatgttca
1921attctttgct gatggccgct cagtggttga cagcataggc aagaggcgct tcagggtgct
1981ccatcagagc cagcgggatg gctacaacac agccgacatt gaatacattg aagaccaaaa
2041ggttcaggga gaggattgtg ctgagctcat gggattacat aactgtgtct atcagcaagc
2101atcattgtgg tttcattcgc tcaaattatc cctaaagaat cggatactca atcactttgg
2161tcccatgccg gagaaagacg ccgatcctca gatgaacccg aatggcccag cctggtgctg
2221gtggatgtta gcagttcttc ccttggaaag ccgagctcag ctccccttcc tagcaatgag
2281gtccttaaag gacagactga atggtattcg acgagtcctg gccttcatat cccgaaacca
2341aaacttgcca actttcttgt acaaagtggt tggtaagcct atccctaacc ctctcctcgg
2401tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa
2461cctctggatt a

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