Construct: ORF ccsbBroad304_15335
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF018827.1_s304c1, BRDN0000459311
- Derived from:
- ccsbBroadEn_15335
- DNA Barcode:
- None
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- AK4P6 (649288)
Vector Information:
- Vector Backbone:
- pLX_304
- Pol II Cassette 1:
- PGK-BlastR
- Pol II Cassette 2:
- CMV-ccsbBroad304_15335
- Selection Marker:
- BlastR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 205 | AK4 | adenylate kinase 4 | NM_001330616.2 | 40.3% | 37% | (many diffs) |
| 2 | human | 205 | AK4 | adenylate kinase 4 | XM_017000613.1 | 40.3% | 37% | (many diffs) |
| 3 | human | 205 | AK4 | adenylate kinase 4 | NM_001005353.2 | 40.2% | 35.4% | (many diffs) |
| 4 | human | 205 | AK4 | adenylate kinase 4 | NM_013410.4 | 40.2% | 35.4% | (many diffs) |
| 5 | human | 205 | AK4 | adenylate kinase 4 | NM_203464.2 | 40.2% | 35.4% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 69
- ORF end:
- 360
- ORF length:
- 291
- Sequence:
-
1 ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag 61 ttggcaccat ggaagtcttg gaatcattta ccaagaagat cctgagcaca gaagttggtg 121 agatggcaaa gcagtatata gagaaaagtc ttttggttcc agaccatgtg atcacatacc 181 taatgatgtc tgagttggag aataggtgtg gccagcactg gctcctcgat ggttttccta 241 ggacattagg acaagccgaa gccctggaca aaatctgtga agtggatcta gtgatcagtt 301 tgaacattcc atttgaaaca cttaaaagat cgtctcagcc gccgttggat tcaccctcct 361 tgccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg 421 attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct 481 ggatta