Construct: ORF ccsbBroad304_15574

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015310.1_s304c1, BRDN0000410865
Derived from:
ccsbBroadEn_15574
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RPL37A (6168)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15574
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6168 RPL37A ribosomal protein L37a NM_000998.5 77.8% 77.1% 216_276delinsG
2 mouse 19981 Rpl37a ribosomal protein L37a NM_009084.4 71.7% 77.1% (many diffs)
3 mouse 70873 Cnbd2 cyclic nucleotide binding d... XM_017319256.1 32.9% 34.5% (many diffs)
4 mouse 751556 Mir682 microRNA 682 NR_030451.1 23.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
282
ORF length:
216
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc caaacgtacc aagaaagtcg ggatcgtcgg taaatacggg acccgctatg
121gggcctccct ccggaaaatg gtgaagaaaa ttgaaatcag ccagcacgcc aagtacactt
181gctctttctg tggcaaaacc aagatgaaga gacgagctgt ggggatctgg cactgtggtt
241cctgcatgaa gacagtggct ggcggtgcct ggacgtacaa gtnnccaact ttcttgtaca
301aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
361ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)