Construct: ORF ccsbBroad304_15625

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003443.1_s304c1, BRDN0000408818
Derived from:
ccsbBroadEn_15625
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF195 (7748)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15625
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7748 ZNF195 zinc finger protein 195 NM_007152.5 100% 100%
2 human 7748 ZNF195 zinc finger protein 195 NM_001242843.2 99.1% 99.1% 1_13del;14_15insT
3 human 7748 ZNF195 zinc finger protein 195 NM_001256825.1 99.1% 99.1% 1_13del;14_15insT
4 human 7748 ZNF195 zinc finger protein 195 NM_001242842.2 95.2% 95.2% 1_13del;14_15insT;237_305del
5 human 7748 ZNF195 zinc finger protein 195 NM_001256824.2 93.9% 93.9% 1_13del;14_15insT;236_328del
6 human 7748 ZNF195 zinc finger protein 195 NM_001130519.3 91.9% 91.9% 226_372del
7 human 7748 ZNF195 zinc finger protein 195 NM_001242841.2 91.2% 91.1% 1_13del;14_15insT;238_384del
8 human 7748 ZNF195 zinc finger protein 195 NM_001130520.3 88.5% 88.5% 225_440del
9 human 7748 ZNF195 zinc finger protein 195 NR_046382.2 52.8% 1_293del;294_295insT;1964_3157del
10 human 7748 ZNF195 zinc finger protein 195 NR_046381.2 51.2% (many diffs)
11 human 7748 ZNF195 zinc finger protein 195 NR_040083.2 50% 1_471del;472_473insT;2142_3335del
12 human 7748 ZNF195 zinc finger protein 195 NM_001256823.2 14.8% 13.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1740
ORF length:
1671
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gactctgttg acgttcaggg atgtggccat agaattctcc ctggaggagt
121ggaaatgcct ggacctcgct cagcagaatt tgtacaggga tgtgatgttg gagaactaca
181gaaacttgtt ctccgttggt ctcactgtct gtaagccagg cctgatcacc tgcctggagc
241aacgaaaaga gccctggaat gtgaagagac aggaggcagc agacggacat ccagctatgt
301cttctcattt tacccaagac cttctgccag agcagggcat acaagatgca ttcccaaaaa
361gaatactgag aggatatgga aattgtggcc ttgataattt atatttaagg aaagactggg
421aaagtttaga tgagtgtaag ttgcaaaaag attataatgg acttaaccaa tgttcatcaa
481ctacccatag caaaatcttt caatataata aatatgttaa aatctttgat aacttttcaa
541atttacatag acgtaatata agtaatactg gagagaaacc tttcaaatgt caagaatgtg
601gcaaatcctt tcaaatgctc tcattcctaa ctgaacatca gaaaattcac actggaaaaa
661aattccaaaa atgtggagaa tgtggcaaaa cctttatcca gtgctcacac tttactgaac
721ctgagaacat tgacactgga gagaaacctt acaagtgtca agaatgtaac aacgtcatta
781aaacttgctc agtccttact aaaaatagaa tttatgccgg aggggaacat tacagatgtg
841aagaatttgg caaagtattt aaccagtgct cccaccttac tgaacatgag catggtactg
901aggaaaaacc ctgcaaatat gaagagtgca gcagtgtctt tatctcttgc tcaagccttt
961ctaatcaaca gatgattctt gctggagaga agctctccaa atgtgaaaca tggtacaaag
1021gttttaacca cagcccaaat ccttccaaac accagagaaa tgagattgga gggaaacctt
1081tcaaatgtga ggaatgtgac agcatcttca agtggttctc agaccttact aaacataaga
1141gaattcacac tggtgagaaa ccatacaaat gtgacgaatg tgggaaagcc tatacacagt
1201cctcacacct cagtgaacac aggaggattc acaccggaga gaaaccctac caatgtgaag
1261aatgtgggaa ggtcttcaga acttgctcaa gcctttctaa ccataagaga actcattctg
1321aagaaaaacc ctacacgtgt gaagaatgtg gcaacatctt taagcagtta tcagacctca
1381ctaagcataa gaaaacccat actggagaga agccctacaa atgtgacgaa tgtggaaaaa
1441actttaccca gtcctccaac cttattgtac ataagagaat tcatactgga gagaaaccct
1501acaagtgtga agaatgtggc agagtcttca tgtggttctc agacattacc aaacataaga
1561aaacccatac tggagagaaa ccctacaaat gtgacgaatg tggaaaaaac tttacccagt
1621cctcaaacct tattgtacat aagagaattc atactggaga gaaaccctac aagtgtgaaa
1681agtgtggcaa agccttcacc cagttctcac acctgactgt acatgaaagc attcatactt
1741nnccaacttt cttgtacaaa gtggttggta agcctatccc taaccctctc ctcggtctcg
1801attctacgta gtaatgagct agcgctaacc ggtggcgcgt taagtcgaca atcaacctct
1861ggatta

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