Construct: ORF ccsbBroad304_15873

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012799.1_s304c1, BRDN0000412045
Derived from:
ccsbBroadEn_15873
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TENT5C (54855)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15873
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54855 TENT5C terminal nucleotidyltransfe... NM_017709.4 100% 100%
2 mouse 74645 Fam46c family with sequence simila... NM_001142952.1 89.9% 95.9% (many diffs)
3 mouse 74645 Fam46c family with sequence simila... XM_006502212.3 89.9% 95.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1242
ORF length:
1173
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcagaggag agcagctgta ccagggattg catgtccttc agcgtgctca
121actgggatca ggttagccgg ctgcatgagg tcctcactga agttgtacct atccacggac
181gaggcaactt tccaaccttg gagataactc tgaaggacat cgtccagacc gtccgcagtc
241ggctggagga ggcaggcatc aaagtgcacg acgtccggct gaatggctcc gcagctggcc
301acgttttggt caaagacaat ggcttgggct gcaaagacct ggacctaatc ttccatgtgg
361ctcttccaac agaggcagaa tttcagctgg ttagagatgt ggttctgtgt tcccttctga
421acttcctgcc agagggtgtg aacaagctca aaatcagtcc agtcactctg aaggaggcat
481atgtgcagaa gctagtgaag gtttgcacgg acactgaccg ctggagcctg atctccctct
541ccaacaagaa cgggaagaac gtggagctga agtttgtcga ctccattcgg cgtcagtttg
601agttcagtgt ggactctttc caaatcatcc tggattcttt gcttttcttc tatgactgtt
661ccaataatcc catctctgag cacttccacc ccaccgtgat tggggagagc atgtacgggg
721actttgagga agcttttgac catctgcaga acagactgat cgccaccaag aacccagaag
781aaatcagagg cgggggactt ctcaagtaca gcaaccttct tgtgcgggac ttcaggccca
841cagaccagga agaaatcaaa actctagagc gctacatgtg ctccaggttc ttcatcgact
901tcccggacat ccttgaacag cagaggaagt tggagactta ccttcaaaac cacttcgctg
961aagaagagag aagcaagtac gactacctca tgatccttcg cagggtggtg aacgagagca
1021ccgtgtgtct catggggcat gaacgcaggc agactctgaa cctcatctcc ctcctggcct
1081tgcgtgtgct ggcggaacaa aacatcatcc ccagtgccac caacgtcacc tgttactacc
1141agccggcccc ttacgtcagt gatggcaact tcagcaacta ctacgttgcc catcctccag
1201tcacctacag ccagccttac cctacctggc tgccctgtaa ctnnccaact ttcttgtaca
1261aagtggttgg taagcctatc cctaaccctc tcctcggtct cgattctacg tagtaatgag
1321ctagcgctaa ccggtggcgc gttaagtcga caatcaacct ctggatta

Download FASTA (ORF) (Full)