Construct: ORF ccsbBroad304_15886

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016437.1_s304c1, BRDN0000407357
Derived from:
ccsbBroadEn_15886
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC186 (55088)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15886
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55088 CCDC186 coiled-coil domain containi... NM_153249.1 99.8% 100% 120T>C
2 human 55088 CCDC186 coiled-coil domain containi... XM_011539916.3 35.5% 35.5% 120T>C;634_1779del
3 human 55088 CCDC186 coiled-coil domain containi... NM_001321829.1 23.4% 23.4% 120T>C;634_2694del
4 human 55088 CCDC186 coiled-coil domain containi... NM_018017.4 23.4% 23.4% 120T>C;634_2694del
5 human 55088 CCDC186 coiled-coil domain containi... NR_135815.1 8% 1_392del;512T>C;1026_7873del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
699
ORF length:
633
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc agagacagac cacatagcct ctacttcctc tgataaaaat gttgggaaaa
121cacctgaatt aaaggaagac tcatgcaact tgttttctgg caatgaaagc agcaaattag
181aaaacgagtc caaactattg tcattaaaca ctgataaaac tttatgtcaa cctaatgagc
241ataataatcg aattgaagcc caggaaaatt atattccaga tcatggtgga ggtgaggatt
301cttgtgccaa aacagacaca ggctcagaaa attctgaaca aatagctaat tttcctagtg
361gaaattttgc taaacatatt tcaaaaacaa atgaaacaga acagaaagta acacaaatat
421tggtggaatt aaggtcatct acatttccag aatcagctaa tgaaaagact tattcagaaa
481gcccctatga tacagactgc accaagaaat ttatttcaaa aataaagagc gtttcagcat
541cagaggattt gttggaagaa atagaatctg agctcttatc tacggagttt gcagaacatc
601gagtaccaaa tggaatgaat aagggagaac atgcattagt tctgtttgaa aagtgtgtgc
661aagataaata tttgcagcag gaacatatca taaaaaagtn nccaactttc ttgtacaaag
721tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
781gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)