Construct: ORF ccsbBroad304_16094

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005102.1_s304c1, BRDN0000404762
Derived from:
ccsbBroadEn_16094
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCDC26 (137196)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_16094
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 137196 CCDC26 CCDC26 long non-coding RNA NR_130918.1 21.8% 1_200del;528_1495del
2 human 137196 CCDC26 CCDC26 long non-coding RNA NR_130919.1 19.8% 1_354del;682_1649del
3 human 137196 CCDC26 CCDC26 long non-coding RNA NR_130920.1 19.6% 1_371del;699_1666del
4 human 137196 CCDC26 CCDC26 long non-coding RNA NR_130917.1 19% 1_423del;751_1718del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
393
ORF length:
327
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga aagattgtgc ctgcagcctg gcctgttgcc cacagcggtc tacctgccac
121actgggaaag atcgagcaga gacagagaag aaaaggaggc tccatttttc aggctgctct
181cccgcaggct catgttttgt gttcatgcca ggcagagaac acaaaatgtt ccaataaata
241agtatcaaag gttagtggtg aaaatgaagg aggaggaggc attgcgtgaa aaactaaaca
301tgcaaaatat tacacacaaa gagaaccaaa atgcaggttc actggaaatg atagacaata
361tgttaaaaca agaggagaga agagagctga aatnnccaac tttcttgtac aaagtggttg
421gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
481accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)