Construct: ORF ccsbBroad304_16097

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005212.1_s304c1, BRDN0000399668
Derived from:
ccsbBroadEn_16097
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZFP28 (140612)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_16097
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 140612 ZFP28 ZFP28 zinc finger protein NM_001308440.1 99.8% 99.4% 29G>A;971C>T
2 human 140612 ZFP28 ZFP28 zinc finger protein NM_020828.2 37.6% 35.3% (many diffs)
3 human 140612 ZFP28 ZFP28 zinc finger protein XM_011526463.3 32.8% 28.6% (many diffs)
4 human 140612 ZFP28 ZFP28 zinc finger protein XM_011526462.3 26.6% 24.3% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1113
ORF length:
1047
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg gggggcggcg agcgcgagtg tccacgagcc gacgccgctc ccgggtagag
121gcgccccccg cacaaagccc cgggcgggcc gaggcccgac tgtagggact ccagccacct
181tggccctccc tgcccgggga aggccgcgct caaggaatgg cctcgcatcc aaaggccagc
241gaggagcggc ccctacgggg cctgggcaca gagctctgcc ttccagggac actgctcttc
301cccaggagag aaacaagaag ctggaggctg tggggacagg aattgaacct aaagccatgt
361cccagggctt ggtgacattt ggggatgtgg ctgtagattt ctcccaagag gagtgggagt
421ggctgaaccc cattcagagg aacttgtaca ggaaggtgat gttggagaac tacaggaacc
481tggcatcgct gggactttgt gtttctaagc ccgatgtgat ctcctcgttg gaacaaggaa
541aagagccttg gacagtgaag cgaaagatga caagagcctg gtgcccagac ttgaaggctg
601tgtggaagat caaggagtta cctctcaaga aggacttctg cgaaggaaag ctatcccagg
661cagtgataac agagagactc acaagctata atctggagta ctctctgtta ggggaacact
721gggattatga tgctctgttt gagacacagc cgggcttggt gactatcaaa aacctggctg
781ttgacttccg ccagcagcta cacccagctc agaagaattt ctgtaagaat gggatatggg
841agaacaacag tgacctggga tcagcaggac attgtgtggc taagccagat ttagtctctt
901tactagagca agagaaggag ccctggatgg tgaagcgaga gctgacagga agcctgttct
961caggtgagtg caggagagcc tggtgtggaa aatctactgc aagagagagc ggagctttta
1021ccaaaaaggc tgcattctca ctaatataca gtaggaaact ttacccaggg tctctgggtc
1081tggaaagaaa attgaactct gggagttcca aatnnccaac tttcttgtac aaagtggttg
1141gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
1201accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)