Construct: ORF ccsbBroadEn_00029

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013996.1_s300c1, BRDN0000398487
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADH7 (131)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 131 ADH7 alcohol dehydrogenase 7 (cl... NM_000673.4 100% 100%
2 human 131 ADH7 alcohol dehydrogenase 7 (cl... NM_001166504.1 95.6% 92.2% (many diffs)
3 mouse 11529 Adh7 alcohol dehydrogenase 7 (cl... NM_009626.4 82.9% 86.2% (many diffs)
4 mouse 11529 Adh7 alcohol dehydrogenase 7 (cl... XM_006500919.3 82.9% 86.2% (many diffs)
5 mouse 11529 Adh7 alcohol dehydrogenase 7 (cl... XM_006500920.2 82% 84.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1227
ORF length:
1158
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GTTTGCAGAA ATACAGATCC AAGACAAAGA CAGGATGGGC ACTGCTGGAA
121AAGTTATTAA ATGCAAAGCA GCTGTGCTTT GGGAGCAGAA GCAACCCTTC TCCATTGAGG
181AAATAGAAGT TGCCCCACCA AAGACTAAAG AAGTTCGCAT TAAGATTTTG GCCACAGGAA
241TCTGTCGCAC AGATGACCAT GTGATAAAAG GAACAATGGT GTCCAAGTTT CCAGTGATTG
301TGGGACATGA GGCAACTGGG ATTGTAGAGA GCATTGGAGA AGGAGTGACT ACAGTGAAAC
361CAGGTGACAA AGTCATCCCT CTCTTTCTGC CACAATGTAG AGAATGCAAT GCTTGTCGCA
421ACCCAGATGG CAACCTTTGC ATTAGGAGCG ATATTACTGG TCGTGGAGTA CTGGCTGATG
481GCACCACCAG ATTTACATGC AAGGGCAAAC CAGTCCACCA CTTCATGAAC ACCAGTACAT
541TTACCGAGTA CACAGTGGTG GATGAATCTT CTGTTGCTAA GATTGATGAT GCAGCTCCTC
601CTGAGAAAGT CTGTTTAATT GGCTGTGGGT TTTCCACTGG ATATGGCGCT GCTGTTAAAA
661CTGGCAAGGT CAAACCTGGT TCCACTTGCG TCGTCTTTGG CCTGGGAGGA GTTGGCCTGT
721CAGTCATCAT GGGCTGTAAG TCAGCTGGTG CATCTAGGAT CATTGGGATT GACCTCAACA
781AAGACAAATT TGAGAAGGCC ATGGCTGTAG GTGCCACTGA GTGTATCAGT CCCAAGGACT
841CTACCAAACC CATCAGTGAG GTGCTGTCAG AAATGACAGG CAACAACGTG GGATACACCT
901TTGAAGTTAT TGGGCATCTT GAAACCATGA TTGATGCCCT GGCATCCTGC CACATGAACT
961ATGGGACCAG CGTGGTTGTA GGAGTTCCTC CATCAGCCAA GATGCTCACC TATGACCCGA
1021TGTTGCTCTT CACTGGACGC ACATGGAAGG GATGTGTCTT TGGAGGTTTG AAAAGCAGAG
1081ATGATGTCCC AAAACTAGTG ACTGAGTTCC TGGCAAAGAA ATTTGACCTG GACCAGTTGA
1141TAACTCATGT TTTACCATTT AAAAAAATCA GTGAAGGATT TGAGCTGCTC AATTCAGGAC
1201AAAGCATTCG AACGGTCCTG ACGTTTTTGC CAACTTTCTT GTACAAAGTt ggcattataa
1261gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)