Construct: ORF ccsbBroadEn_00158

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001797.1_s300c1, BRDN0000389580
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BCS1L (617)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001079866.2 100% 100%
2 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001257342.2 100% 100%
3 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001257343.2 100% 100%
4 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001257344.2 100% 100%
5 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001320717.2 100% 100%
6 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371443.1 100% 100%
7 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371444.1 100% 100%
8 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371446.1 100% 100%
9 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371447.1 100% 100%
10 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371448.1 100% 100%
11 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371449.1 100% 100%
12 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371450.1 100% 100%
13 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001374085.1 100% 100%
14 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_004328.5 100% 100%
15 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001318836.2 71.3% 71.3% 0_1ins360
16 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371451.1 71.3% 71.3% 0_1ins360
17 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371452.1 60.1% 60.1% 0_1ins501
18 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371453.1 60.1% 60.1% 0_1ins501
19 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371454.1 60.1% 60.1% 0_1ins501
20 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371455.1 60.1% 60.1% 0_1ins501
21 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001371456.1 60.1% 60.1% 0_1ins501
22 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NM_001374086.1 60.1% 60.1% 0_1ins501
23 human 617 BCS1L BCS1 homolog, ubiquinol-cyt... NR_163955.1 53.7% 1_1012del;1731_1732insCACAG;2265_2324del
24 mouse 66821 Bcs1l BCS1-like (yeast) NM_001305652.1 89.1% 93.7% (many diffs)
25 mouse 66821 Bcs1l BCS1-like (yeast) NM_025784.5 89.1% 93.7% (many diffs)
26 mouse 66821 Bcs1l BCS1-like (yeast) XR_001785495.1 40.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1323
ORF length:
1257
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCC ACTTTCAGAC TTTATTCTGG CTCTGAAGGA CAATCCCTAC TTTGGGGCTG
121GATTTGGGCT GGTGGGTGTG GGCACAGCCC TGGCCCTGGC CCGGAAGGGT GTCCAACTGG
181GCCTGGTGGC ATTCCGGCGC CATTACATGA TCACACTGGA AGTCCCTGCT CGAGACAGGA
241GCTATGCCTG GTTGCTTAGC TGGCTCACCC GCCACAGTAC CCGTACTCAG CACCTCAGTG
301TCGAGACTTC GTACCTTCAG CATGAGAGTG GCCGCATTTC CACTAAGTTT GAATTTGTCC
361CCAGCCCTGG AAACCATTTT ATCTGGTATC GGGGGAAATG GATTCGGGTA GAACGAAGTC
421GAGAGATGCA GATGATAGAC TTGCAGACGG GGACTCCTTG GGAATCTGTC ACCTTCACGG
481CCCTGGGCAC TGACCGAAAG GTTTTCTTCA ACATCCTGGA GGAAGCTCGA GAGCTAGCCT
541TGCAGCAGGA GGAAGGGAAG ACCGTGATGT ACACAGCTGT GGGCTCTGAA TGGCGTCCCT
601TTGGCTATCC ACGCCGCCGG CGACCACTGA ATTCTGTGGT TCTACAACAG GGTCTGGCTG
661ACCGAATTGT CAGAGACGTC CAGGAATTCA TCGATAACCC CAAGTGGTAC ACTGACAGAG
721GCATTCCTTA CAGACGTGGC TACCTGCTTT ATGGGCCCCC TGGTTGCGGA AAGAGCAGTT
781TTATCACAGC CCTGGCTGGG GAACTGGAGC ACAGCATCTG CCTGCTGAGC CTCACGGACT
841CCAGCCTCTC TGATGACCGA CTCAACCACC TGCTGAGCGT GGCCCCGCAG CAGAGCCTGG
901TACTCCTGGA GGATGTGGAT GCTGCTTTTC TCAGTCGAGA CTTGGCTGTG GAGAACCCAG
961TAAAGTACCA AGGCCTAGGT CGCCTCACCT TCAGTGGACT GCTCAATGCC TTGGATGGTG
1021TGGCTTCCAC CGAGGCCCGC ATCGTGTTCA TGACCACCAA CCACGTTGAC AGGCTGGACC
1081CTGCCCTGAT ACGCCCGGGG CGAGTGGACC TGAAGGAGTA CGTGGGCTAC TGCTCACACT
1141GGCAGCTGAC CCAGATGTTC CAGAGGTTCT ATCCAGGGCA GGCACCTTCC TTAGCTGAGA
1201ACTTTGCAGA ACATGTCCTT CGAGCTACAA ACCAGATCAG TCCTGCCCAG GTGCAGGGCT
1261ACTTCATGCT GTATAAAAAT GACCCTGTAG GGGCAATTCA CAATGCTGAG TCTCTGAGGA
1321GGTGCCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1381gcaacgaac

Download FASTA (ORF) (Full)