Construct: ORF ccsbBroadEn_00332

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001242.1_s300c1, BRDN0000396507
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCR3 (1232)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1232 CCR3 C-C motif chemokine receptor 3 NM_001837.4 100% 100%
2 human 1232 CCR3 C-C motif chemokine receptor 3 NM_178329.3 100% 100%
3 human 1232 CCR3 C-C motif chemokine receptor 3 XM_006712960.3 100% 100%
4 human 1232 CCR3 C-C motif chemokine receptor 3 XM_011533335.2 100% 100%
5 human 1232 CCR3 C-C motif chemokine receptor 3 NM_001164680.2 95.1% 95.1% 1_54del
6 human 1232 CCR3 C-C motif chemokine receptor 3 NM_178328.1 94.4% 94.4% 1_63del
7 human 1232 CCR3 C-C motif chemokine receptor 3 XM_017005685.1 86.5% 86.5% 1_165del
8 human 1232 CCR3 C-C motif chemokine receptor 3 XM_017005686.1 86.5% 86.5% 1_165del
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1131
ORF length:
1065
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAC AACCTCACTA GATACAGTTG AGACCTTTGG TACCACATCC TACTATGATG
121ACGTGGGCCT GCTCTGTGAA AAAGCTGATA CCAGAGCACT GATGGCCCAG TTTGTGCCCC
181CGCTGTACTC CCTGGTGTTC ACTGTGGGCC TCTTGGGCAA TGTGGTGGTG GTGATGATCC
241TCATAAAATA CAGGAGGCTC CGAATTATGA CCAACATCTA CCTGCTCAAC CTGGCCATTT
301CGGACCTGCT CTTCCTCGTC ACCCTTCCAT TCTGGATCCA CTATGTCAGG GGGCATAACT
361GGGTTTTTGG CCATGGCATG TGTAAGCTCC TCTCAGGGTT TTATCACACA GGCTTGTACA
421GCGAGATCTT TTTCATAATC CTGCTGACAA TCGACAGGTA CCTGGCCATT GTCCATGCTG
481TGTTTGCCCT TCGAGCCCGG ACTGTCACTT TTGGTGTCAT CACCAGCATC GTCACCTGGG
541GCCTGGCAGT GCTAGCAGCT CTTCCTGAAT TTATCTTCTA TGAGACTGAA GAGTTGTTTG
601AAGAGACTCT TTGCAGTGCT CTTTACCCAG AGGATACAGT ATATAGCTGG AGGCATTTCC
661ACACTCTGAG AATGACCATC TTCTGTCTCG TTCTCCCTCT GCTCGTTATG GCCATCTGCT
721ACACAGGAAT CATCAAAACG CTGCTGAGGT GCCCCAGTAA AAAAAAGTAC AAGGCCATCC
781GGCTCATTTT TGTCATCATG GCGGTGTTTT TCATTTTCTG GACACCCTAC AATGTGGCTA
841TCCTTCTCTC TTCCTATCAA TCCATCTTAT TTGGAAATGA CTGTGAGCGG AGCAAGCATC
901TGGACCTGGT CATGCTGGTG ACAGAGGTGA TCGCCTACTC CCACTGCTGC ATGAACCCGG
961TGATCTACGC CTTTGTTGGA GAGAGGTTCC GGAAGTACCT GCGCCACTTC TTCCACAGGC
1021ACTTGCTCAT GCACCTGGGC AGATACATCC CATTCCTTCC TAGTGAGAAG CTGGAAAGAA
1081CCAGCTCTGT CTCTCCATCC ACAGCAGAGC CGGAACTCTC TATTGTGTTT TACCCAACTT
1141TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)