Construct: ORF ccsbBroadEn_00417

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002661.1_s300c1, BRDN0000386612
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DAB2 (1601)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1601 DAB2 DAB adaptor protein 2 NM_001343.4 100% 100%
2 human 1601 DAB2 DAB adaptor protein 2 NM_001244871.1 97.2% 97.2% 624_625ins63
3 mouse 13132 Dab2 disabled 2, mitogen-respons... NM_023118.5 84.7% 83.3% (many diffs)
4 mouse 13132 Dab2 disabled 2, mitogen-respons... XM_011245324.1 84.7% 83.3% (many diffs)
5 mouse 13132 Dab2 disabled 2, mitogen-respons... XM_017316424.1 84.7% 83.3% (many diffs)
6 mouse 13132 Dab2 disabled 2, mitogen-respons... NM_001310446.1 82.1% 80.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2376
ORF length:
2310
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC TAACGAAGTA GAAACAAGTG CAACCAATGG TCAGCCCGAC CAACAGGCCG
121CACCAAAAGC ACCCTCAAAG AAGGAAAAAA AGAAAGGCCC TGAAAAGACA GATGAATATC
181TCTTAGCAAG GTTCAAAGGC GATGGTGTAA AATATAAGGC CAAGCTGATT GGCATTGATG
241ATGTGCCAGA TGCAAGAGGG GATAAAATGA GCCAAGACTC TATGATGAAA CTAAAGGGAA
301TGGCGGCAGC TGGTCGGTCT CAGGGACAAC ACAAACAAAG GATCTGGGTC AACATTTCCC
361TTTCTGGGAT AAAAATAATT GATGAGAAAA CTGGGGTAAT AGAGCATGAA CATCCAGTAA
421ATAAGATTTC TTTCATTGCC CGTGATGTGA CAGACAACCG GGCATTTGGT TACGTGTGTG
481GAGGAGAAGG CCAGCATCAG TTTTTTGCCA TAAAAACCGG GCAACAGGCT GAACCATTAG
541TTGTTGATCT TAAAGACCTT TTTCAAGTTA TCTATAATGT AAAGAAAAAG GAAGAAGAAA
601AGAAAAAGAT AGAGGAAGCC AGCAAAGCAG TTGAGAATGG GAGTGAGGCC CTAATGATTC
661TAGATGACCA AACTAACAAA CTGAAATCGG GTGTTGACCA GATGGATTTG TTTGGGGACA
721TGTCTACACC TCCTGACCTA AATAGTCCAA CAGAAAGCAA AGATATCCTG TTAGTGGATC
781TAAACTCTGA AATCGACACC AATCAGAATT CTTTAAGAGA AAATCCATTC TTAACAAACG
841GCATCACCTC CTGTTCTCTT CCTCGACCAA CGCCTCAGGC ATCCTTCTTG CCTGAAAATG
901CCTTTTCTGC CAATCTCAAC TTCTTTCCCA CCCCTAATCC TGATCCTTTC CGTGACGATC
961CTTTCACACA GCCAGACCAA TCGACACCTT CTTCGTTTGA TTCTCTCAAA TCTCCAGATC
1021AGAAGAAAGA GAATTCGAGT AGCTCGTCTA CTCCGCTGAG TAATGGGCCC CTGAATGGTG
1081ATGTTGACTA CTTTGGTCAG CAATTTGACC AGATCTCTAA CCGGACTGGC AAACAGGAAG
1141CTCAGGCAGG CCCATGGCCC TTTTCAAGTT CGCAAACCCA GCCAGCAGTG AGAACTCAAA
1201ATGGGGTATC TGAAAGAGAA CAGAACGGCT TCTCTGTCAA ATCCTCCCCG AACCCTTTTG
1261TGGGAAGCCC TCCCAAAGGA CTGTCCATAC AGAATGGCGT AAAGCAGGAC TTGGAAAGCT
1321CTGTCCAGTC CTCACCACAT GACTCCATAG CCATTATCCC ACCTCCACAA AGTACCAAAC
1381CAGGAAGAGG CAGAAGGACT GCTAAGTCTT CAGCCAATGA CTTGCTTGCA TCAGACATCT
1441TTGCTCCTCC CGTCTCAGAA CCTTCAGGCC AGGCGTCACC CACAGGACAA CCTACAGCCC
1501TGCAGCCCAA CCCTCTGGAT CTCTTCAAAA CAAGTGCTCC TGCCCCAGTG GGGCCCCTGG
1561TGGGTCTAGG TGGTGTAACT GTCACACTCC CTCAGGCAGG ACCATGGAAC ACAGCATCTT
1621TGGTCTTCAA TCAGTCCCCT TCAATGGCTC CGGGAGCCAT GATGGGTGGT CAACCTTCAG
1681GTTTTAGTCA GCCCGTCATT TTTGGTACAA GTCCAGCTGT TTCAGGTTGG AACCAGCCTT
1741CACCCTTTGC AGCCTCAACT CCCCCTCCAG TGCCTGTTGT CTGGGGCCCT TCTGCATCTG
1801TGGCACCCAA TGCTTGGTCA ACAACAAGCC CTTTGGGGAA TCCTTTTCAG AGCAATATTT
1861TTCCAGCTCC TGCTGTGTCC ACTCAGCCCC CATCCATGCA CTCCTCTCTC CTGGTCACTC
1921CTCCTCAGCC ACCTCCCAGA GCTGGCCCTC CCAAGGACAT CTCCAGTGAT GCCTTCACTG
1981CCTTAGACCC ACTTGGGGAT AAAGAGATCA AGGATGTGAA AGAAATGTTT AAGGATTTCC
2041AACTGCGGCA GCCACCTGCT GTGCCCGCGC GGAAGGGAGA GCAGACTTCT TCTGGGACTT
2101TGAGTGCCTT TGCCAGTTAT TTCAACAGCA AGGTTGGCAT TCCTCAGGAG AATGCAGACC
2161ATGATGACTT TGATGCTAAT CAACTATTGA ACAAGATCAA TGAACCACCA AAGCCAGCTC
2221CCAGACAAGT TTCCCTGCCA GTTACCAAAT CTACTGACAA TGCATTTGAG AACCCTTTCT
2281TTAAAGATTC TTTTGGTTCA TCACAAGCCT CTGTGGCTTC TTCTCAACCT GTATCTTCTG
2341AGATGTATAG GGATCCATTT GGAAATCCTT TTGCCTACCC AACTTTCTTG TACAAAGTtg
2401gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

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