Construct: ORF ccsbBroadEn_00540

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012391.1_s300c1, BRDN0000396802
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FARSA (2193)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2193 FARSA phenylalanyl-tRNA synthetas... NM_004461.3 100% 100%
2 mouse 66590 Farsa phenylalanyl-tRNA synthetas... NM_025648.3 85.8% 92.5% (many diffs)
3 mouse 66590 Farsa phenylalanyl-tRNA synthetas... XR_387772.4 69.6% (many diffs)
4 mouse 66590 Farsa phenylalanyl-tRNA synthetas... NR_152751.1 67.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1590
ORF length:
1524
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGATGGTCAG GTGGCGGAAC TGCTGCTCCG GCGGCTGGAG GCGTCTGATG
121GCGGCCTGGA CAGCGCCGAG TTGGCGGCTG AGCTGGGCAT GGAGCACCAG GCGGTGGTGG
181GCGCCGTGAA GAGCCTTCAG GCGCTGGGCG AGGTCATCGA GGCTGAACTT CGGTCCACCA
241AGCACTGGGA GCTTACTGCG GAGGGCGAGG AGATTGCCCG GGAGGGCAGC CATGAGGCCC
301GTGTGTTTCG AAGCATTCCC CCAGAGGGCC TGGCCCAGAG CGAGCTTATG CGACTGCCCA
361GTGGCAAAGT GGGCTTCAGC AAGGCCATGT CCAACAAGTG GATTCGGGTG GACAAGAGTG
421CGGCTGACGG GCCCCGGGTG TTCCGAGTGG TGGACAGCAT GGAGGATGAG GTGCAGCGGC
481GGCTCCAGCT GGTCCGGGGG GGACAGGCTG AGAAGCTGGG GGAGAAGGAG AGGAGCGAGC
541TGAGGAAGAG GAAGCTGTTG GCTGAAGTGA CTCTGAAGAC CTACTGGGTG AGCAAAGGCA
601GTGCCTTTAG TACCAGCATC TCCAAGCAAG AGACAGAGCT GAGCCCAGAG ATGATCTCCA
661GTGGCTCTTG GCGGGACCGG CCCTTCAAGC CCTACAACTT CTTGGCCCAC GGTGTCCTCC
721CCGACAGCGG CCACCTTCAC CCGCTGCTCA AGGTCCGCTC CCAGTTCCGA CAGATCTTCC
781TGGAGATGGG GTTCACCGAG ATGCCGACTG ATAACTTCAT TGAGAGCTCC TTCTGGAACT
841TTGACGCCCT CTTCCAGCCC CAGCAGCACC CAGCCCGTGA CCAGCACGAC ACCTTCTTCC
901TTCGAGATCC AGCGGAGGCC CTGCAGCTCC CAATGGACTA TGTCCAGCGG GTCAAGCGGA
961CCCACTCTCA GGGCGGCTAC GGCTCACAGG GGTACAAGTA TAACTGGAAG CTGGACGAGG
1021CCCGGAAAAA CCTACTGCGA ACCCACACCA CATCAGCCAG CGCCCGTGCG CTCTACCGCC
1081TTGCCCAGAA GAAGCCCTTC ACTCCGGTCA AGTACTTCTC CATCGACCGC GTATTCCGGA
1141ATGAGACCCT GGACGCCACG CACCTGGCTG AGTTCCACCA GATCGAGGGC GTGGTGGCGG
1201ATCATGGTCT CACCTTGGGC CACCTCATGG GCGTTCTGCG GGAGTTCTTC ACCAAGCTGG
1261GTATCACGCA ACTCCGCTTC AAGCCAGCCT ACAACCCATA CACAGAGCCC AGCATGGAGG
1321TGTTCAGCTA CCACCAAGGC CTGAAGAAGT GGGTGGAGGT CGGAAACTCG GGGGTCTTCC
1381GTCCAGAGAT GCTGCTGCCC ATGGGGCTTC CCGAGAACGT GTCGGTCATT GCCTGGGGCC
1441TCTCCCTGGA GCGCCCAACG ATGATCAAAT ATGGCATCAA CAATATCCGG GAGCTGGTGG
1501GCCACAAGGT GAACCTGCAG ATGGTGTATG ACAGTCCCCT GTGCCGCCTG GATGCCGAGC
1561CGAGGCCCCC TCCCACACAG GAGGCTGCGT GCCCAACTTT CTTGTACAAA GTtggcatta
1621taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)

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