Construct: ORF ccsbBroadEn_01099

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014753.1_s300c1, BRDN0000389684
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NINJ1 (4814)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4814 NINJ1 ninjurin 1 NM_004148.4 100% 100%
2 human 4814 NINJ1 ninjurin 1 XM_011518716.1 67.1% 67.1% 0_1ins150
3 mouse 18081 Ninj1 ninjurin 1 NM_013610.2 87% 89.4% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
522
ORF length:
456
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CTCGGGAACC GAGGAGTACG AGCTCAACGG CGGCCTGCCT CCGGGCACAC
121CCGGCTCCCC GGACGCCTCG CCGGCCCGCT GGGGCTGGAG GCACGGGCCC ATCAACGTGA
181ACCATTACGC CAGCAAGAAG AGCGCAGCCG AGAGCATGCT GGACATCGCG CTGCTGATGG
241CCAACGCGTC CCAGCTGAAG GCCGTCGTGG AACAGGGCCC CAGCTTCGCC TTCTATGTGC
301CCCTGGTGGT CCTCATCTCC ATCTCCCTTG TGCTGCAGAT CGGCGTGGGG GTGCTGCTCA
361TCTTCCTTGT CAAGTACGAC CTTAACAACC CGGCCAAGCA CGCCAAGCTG GACTTCCTCA
421ACAACCTGGC CACGGGCCTG GTGTTCATCA TCGTGGTAGT CAACATCTTC ATCACGGCCT
481TCGGGGTCCA GAAGCCCTTG ATGGACATGG CACCCCAGCA GTACCCAACT TTCTTGTACA
541AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)