Construct: ORF ccsbBroadEn_01841

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001489.1_s300c1, BRDN0000393339
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BAG6 (7917)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7917 BAG6 BAG cochaperone 6 NM_001098534.2 100% 100%
2 human 7917 BAG6 BAG cochaperone 6 NM_080702.3 100% 100%
3 human 7917 BAG6 BAG cochaperone 6 NM_080703.3 100% 100%
4 human 7917 BAG6 BAG cochaperone 6 XM_024446547.1 100% 100%
5 human 7917 BAG6 BAG cochaperone 6 XM_017011292.2 99.9% 99.9% 1559_1560insGCA
6 human 7917 BAG6 BAG cochaperone 6 NM_004639.3 99.4% 99.4% 551_568del
7 human 7917 BAG6 BAG cochaperone 6 XM_017011289.2 99.2% 99.2% 1368_1394del
8 human 7917 BAG6 BAG cochaperone 6 XM_017011293.2 98.4% 98.4% 423_424ins54
9 human 7917 BAG6 BAG cochaperone 6 XM_017011294.2 97.6% 97.6% 1368_1369ins78
10 human 7917 BAG6 BAG cochaperone 6 XM_017011287.2 96.9% 96.9% 1447_1554del
11 human 7917 BAG6 BAG cochaperone 6 XM_017011284.2 96.1% 96.1% 1368_1394del;1474_1581del
12 human 7917 BAG6 BAG cochaperone 6 XM_011514892.3 95.9% 95.9% 1447_1587del
13 human 7917 BAG6 BAG cochaperone 6 NM_001199698.1 95.6% 95.6% 3136_3137ins147
14 human 7917 BAG6 BAG cochaperone 6 XM_017011296.2 95.5% 95.5% 1559_1560insGCA;3133_3134ins147
15 human 7917 BAG6 BAG cochaperone 6 XM_017011275.2 95.2% 95.2% 1368_1394del;1474_1614del
16 human 7917 BAG6 BAG cochaperone 6 XM_017011276.2 95.2% 95.2% 1368_1394del;1474_1614del
17 human 7917 BAG6 BAG cochaperone 6 XM_017011277.2 95.2% 95.2% 1368_1394del;1474_1614del
18 human 7917 BAG6 BAG cochaperone 6 XM_017011278.2 95.2% 95.2% 1368_1394del;1474_1614del
19 human 7917 BAG6 BAG cochaperone 6 XM_017011279.2 95.2% 95.2% 1368_1394del;1474_1614del
20 human 7917 BAG6 BAG cochaperone 6 XM_017011280.2 95.2% 95.2% 1368_1394del;1474_1614del
21 human 7917 BAG6 BAG cochaperone 6 XM_017011281.2 95.2% 95.2% 1368_1394del;1474_1614del
22 human 7917 BAG6 BAG cochaperone 6 XM_017011282.2 95.2% 95.2% 1368_1394del;1474_1614del
23 human 7917 BAG6 BAG cochaperone 6 XM_024446545.1 95.2% 95.2% 1368_1394del;1474_1614del
24 human 7917 BAG6 BAG cochaperone 6 XM_024446546.1 95.2% 95.2% 1368_1394del;1474_1614del
25 human 7917 BAG6 BAG cochaperone 6 XM_017011283.2 95.1% 95.1% 1368_1394del;1474_1614del;1727_1728insGCA
26 human 7917 BAG6 BAG cochaperone 6 XM_017011285.2 93.7% 93.7% 423_424ins54;1314_1340del;1420_1560del
27 human 7917 BAG6 BAG cochaperone 6 XM_017011286.2 93.7% 93.7% 423_424ins54;1314_1340del;1420_1560del
28 human 7917 BAG6 BAG cochaperone 6 XM_017011298.2 91.2% 91.2% 1559_1560insGCA;2883_2884ins144;2989_2990ins147
29 human 7917 BAG6 BAG cochaperone 6 XM_017011290.2 91.2% 91.2% 1368_1394del;1474_1614del;3054_3055ins144
30 human 7917 BAG6 BAG cochaperone 6 XM_017011291.2 91.1% 91.1% 1368_1394del;1474_1614del;3304_3305ins147
31 human 7917 BAG6 BAG cochaperone 6 XM_017011297.2 91% 91% (many diffs)
32 human 7917 BAG6 BAG cochaperone 6 XM_017011295.2 87% 87% (many diffs)
33 human 7917 BAG6 BAG cochaperone 6 NM_001199697.1 80.1% 80.1% (many diffs)
34 mouse 224727 Bag6 BCL2-associated athanogene 6 NM_057171.2 87% 92.1% (many diffs)
35 mouse 224727 Bag6 BCL2-associated athanogene 6 NM_001252468.1 85.4% 90.5% (many diffs)
36 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524111.3 84.3% 89.3% (many diffs)
37 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524112.2 84.3% 89.3% (many diffs)
38 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524113.2 84.3% 89.3% (many diffs)
39 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524114.2 84.3% 89.2% (many diffs)
40 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524110.2 84% 88.9% (many diffs)
41 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317433.1 83.9% 88.8% (many diffs)
42 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524117.3 82.9% 87.8% (many diffs)
43 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524116.2 82.5% 87.4% (many diffs)
44 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524118.3 81.5% 86.3% (many diffs)
45 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317431.1 81.5% 86.2% (many diffs)
46 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317432.1 81% 85.7% (many diffs)
47 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524109.2 80.1% 84.9% (many diffs)
48 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524119.1 80% 84.8% (many diffs)
49 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317436.1 79.9% 84.7% (many diffs)
50 mouse 224727 Bag6 BCL2-associated athanogene 6 NM_001252469.1 78.8% 83.6% (many diffs)
51 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_006524115.2 77.7% 82.3% (many diffs)
52 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317434.1 77.1% 81.8% (many diffs)
53 mouse 224727 Bag6 BCL2-associated athanogene 6 XM_017317435.1 76.2% 80.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3444
ORF length:
3378
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GCCTAATGAT AGTACCAGTA CCGCTGTGGA GGAGCCTGAC AGCTTGGAGG
121TGTTGGTGAA GACCTTGGAC TCTCAAACTC GTACCTTTAT TGTGGGGGCC CAGATGAATG
181TAAAAGAGTT TAAGGAGCAC ATTGCTGCCT CTGTCAGCAT CCCATCTGAA AAACAACGGC
241TCATTTACCA GGGACGAGTT CTGCAAGATG ATAAGAAGCT TCAGGAATAC AATGTTGGGG
301GAAAGGTTAT CCACCTGGTG GAACGGGCTC CTCCTCAGAC TCACCTCCCT TCTGGGGCAT
361CTTCTGGGAC GGGGTCTGCC TCAGCCACTC ATGGTGGGGG ATCCCCCCCT GGTACTCGGG
421GGCCTGGGGC CTCTGTTCAT GACCGGAATG CCAACAGCTA TGTCATGGTT GGAACCTTCA
481ATCTTCCTAG TGACGGCTCT GCTGTGGATG TTCACATCAA CATGGAACAG GCCCCGATTC
541AGAGTGAGCC CCGGGTACGG CTGGTGATGG CTCAGCACAT GATCAGGGAT ATACAGACCT
601TACTATCCCG GATGGAGTGT CGAGGAGGGC CCCAACCGCA GCACAGTCAG CCGCCCCCGC
661AGCCACCGGC TGTGACCCCG GAGCCAGTAG CCTTGAGCTC TCAAACATCA GAACCAGTTG
721AAAGTGAAGC ACCTCCCCGG GAGCCCATGG AGGCAGAAGA AGTGGAGGAG CGTGCCCCAG
781CCCAGAACCC GGAGCTCACT CCTGGCCCAG CCCCAGCGGG CCCAACACCT GCCCCGGAAA
841CAAATGCACC CAACCATCCT TCCCCTGCGG AGTATGTCGA GGTGCTCCAG GAGCTACAGC
901GGCTGGAGAG TCGCCTCCAG CCCTTCTTGC AGCGCTACTA CGAGGTTCTG GGTGCTGCTG
961CCACCACGGA CTACAATAAC AATCACGAGG GCCGGGAGGA GGATCAGCGG TTGATCAACT
1021TGGTAGGGGA GAGCCTGCGA CTGCTGGGCA ACACCTTTGT TGCACTGTCT GACCTGCGCT
1081GCAATCTGGC CTGCACGCCC CCACGACACC TGCATGTGGT CCGGCCTATG TCTCACTACA
1141CCACCCCCAT GGTGCTCCAG CAGGCAGCCA TTCCCATACA GATCAATGTG GGAACCACTG
1201TGACCATGAC AGGAAATGGG ACTCGGCCCC CCCCAACTCC CAATGCAGAG GCACCTCCCC
1261CTGGTCCTGG GCAGGCCTCA TCCGTGGCTC CGTCTTCTAC CAATGTCGAG TCCTCAGCTG
1321AGGGGGCTCC CCCGCCAGGT CCAGCTCCCC CGCCAGCCAC CAGCCACCCG AGGGTCATCC
1381GGATTTCCCA CCAGAGTGTG GAACCCGTGG TCATGATGCA CATGAACATT CAAGATTCTG
1441GCACACAGCC TGGTGGTGTT CCGAGTGCTC CCACTGGCCC CCTGGGACCC CCTGGTCATG
1501GCCAAACCCT GGGACAGCAG GTGCCAGGCT TCCCAACAGC TCCAACCCGG GTGGTGATTG
1561CCCGGCCCAC TCCTCCACAG GCTCGGCCTT CCCATCCTGG AGGGCCCCCA GTCTCTGGGA
1621CACTGCAGGG CGCCGGTCTG GGTACCAATG CCTCGTTGGC CCAGATGGTG AGCGGCCTTG
1681TGGGGCAGCT TCTTATGCAG CCAGTCCTTG TGGCTCAGGG GACCCCAGGT ATGGCTCCAC
1741CGCCAGCCCC TGCCACTGCT TCTGCCAGTG CTGGCACCAC CAACACAGCT ACCACAGCTG
1801GCCCCGCTCC TGGGGGGCCT GCCCAGCCTC CACCCACCCC TCAACCCTCC ATGGCTGATC
1861TTCAGTTCTC TCAGCTTCTG GGGAACCTGC TAGGGCCTGC AGGGCCAGGG GCTGGAGGGT
1921CTGGTGTGGC TTCTCCCACC ATCACTGTGG CGATGCCTGG TGTCCCTGCC TTTCTCCAAG
1981GCATGACTGA CTTCTTGCAG GCAACACAGA CAGCCCCTCC ACCACCCCCA CCTCCTCCAC
2041CCCCACCACC TGCCCCAGAG CAGCAGACCA TGCCCCCACC AGGCTCCCCT TCTGGTGGCG
2101CAGGGAGTCC TGGAGGCCTG GGTCTTGAGA GCCTGTCACC GGAGTTTTTT ACCTCAGTGG
2161TGCAGGGTGT GCTCAGCTCC CTGCTGGGCT CCCTGGGGGC TCGGGCTGGC AGCAGTGAAA
2221GTATTGCTGC CTTCATACAA CGCCTCAGTG GATCCAGCAA CATCTTTGAG CCTGGAGCTG
2281ATGGGGCCCT TGGATTCTTT GGGGCCTTGC TTTCTCTTCT GTGCCAGAAC TTCTCTATGG
2341TGGACGTAGT GATGCTTCTC CATGGGCATT TCCAGCCACT ACAACGGCTC CAGCCCCAGC
2401TGCGATCCTT CTTCCACCAG CACTACCTGG GTGGTCAGGA GCCCACACCC AGTAACATCC
2461GGATGGCAAC CCACACATTG ATCACGGGGC TAGAAGAGTA TGTGCGGGAG AGTTTTTCCT
2521TGGTGCAGGT TCAGCCAGGT GTGGACATCA TCCGGACAAA CCTGGAATTT CTCCAAGAGC
2581AGTTTAATAG CATTGCTGCG CATGTGCTGC ATTGCACAGA TAGTGGATTT GGGGCCCGGT
2641TGCTGGAGTT GTGTAACCAA GGCCTGTTTG AATGCCTGGC CCTAAACCTG CACTGCTTGG
2701GGGGACAGCA GATGGAGCTT GCTGCTGTTA TCAATGGCCG AATTCGTCGT ATGTCTCGTG
2761GGGTGAATCC CTCCTTGGTG AGCTGGCTGA CCACTATGAT GGGACTGAGG CTTCAGGTGG
2821TACTGGAGCA CATGCCTGTA GGCCCTGATG CCATTCTCAG ATACGTTCGC AGGGTTGGTG
2881ATCCCCCCCA GCCACTTCCT GAGGAGCCAA TGGAAGTTCA GGGAGCAGAA AGAGCTTCCC
2941CTGAGCCTCA GCGGGAGAAT GCTTCCCCAG CCCCTGGAAC AACAGCAGAA GAGGCCATGT
3001CCCGAGGTCC ACCTCCTGCT CCTGAGGGGG GCTCCCGGGA TGAACAGGAT GGAGCTTCAG
3061CTGAGACAGA ACCTTGGGCA GCTGCAGTCC CCCCAGAATG GGTCCCTATT ATCCAGCAGG
3121ACATTCAGAG CCAGCGGAAG GTGAAACCGC AGCCCCCTCT GAGTGATGCC TACCTCAGTG
3181GTATGCCTGC CAAGAGACGC AAGACGATGC AGGGTGAGGG CCCCCAGCTG CTTCTCTCAG
3241AGGCTGTGAG CCGGGCAGCT AAGGCAGCCG GAGCTCGGCC CCTGACGAGC CCCGAGAGCC
3301TGAGCCGGGA CCTGGAGGCA CCAGAGGTTC AGGAGAGCTA CAGGCAGCAG CTCCGGTCTG
3361ATATACAAAA ACGACTGCAG GAAGACCCCA ACTACAGTCC CCAGCGCTTC CCCAATGCCC
3421AGCGGGCCTT TGCTGATGAT CCTTACCCAA CTTTCTTGTA CAAAGTtggc attataagaa
3481agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)

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