Construct: ORF ccsbBroadEn_01931

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017613.1_s300c1, BRDN0000388363
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TPST2 (8459)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8459 TPST2 tyrosylprotein sulfotransfe... NM_001008566.3 100% 100%
2 human 8459 TPST2 tyrosylprotein sulfotransfe... NM_001362922.2 100% 100%
3 human 8459 TPST2 tyrosylprotein sulfotransfe... NM_003595.5 100% 100%
4 human 8459 TPST2 tyrosylprotein sulfotransfe... NM_001362923.2 87.4% 87.4% 1_162del
5 human 8459 TPST2 tyrosylprotein sulfotransfe... XM_024452294.1 84.3% 84.3% 1_210del
6 mouse 22022 Tpst2 protein-tyrosine sulfotrans... NM_001326590.1 85.7% 91% (many diffs)
7 mouse 22022 Tpst2 protein-tyrosine sulfotrans... NM_009419.4 85.7% 91% (many diffs)
8 mouse 22022 Tpst2 protein-tyrosine sulfotrans... XM_006534850.2 85.7% 91% (many diffs)
9 mouse 22022 Tpst2 protein-tyrosine sulfotrans... XM_017320800.1 85.7% 91% (many diffs)
10 mouse 22022 Tpst2 protein-tyrosine sulfotrans... XM_006534849.3 75.8% 80.5% (many diffs)
11 mouse 22022 Tpst2 protein-tyrosine sulfotrans... XR_389265.2 56.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1197
ORF length:
1131
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGCG CCTGTCGGTG CGGAGGGTGC TGCTGGCAGC CGGCTGCGCC CTGGTCCTGG
121TGCTGGCGGT TCAGCTGGGA CAGCAGGTGC TAGAGTGCCG GGCGGTGCTG GCGGGCCTGC
181GGAGCCCCCG GGGGGCCATG CGGCCTGAGC AGGAGGAGCT GGTGATGGTG GGCACCAACC
241ACGTGGAATA CCGCTATGGC AAGGCCATGC CGCTCATCTT CGTGGGTGGC GTGCCTCGCA
301GTGGCACCAC GTTGATGCGC GCCATGCTGG ACGCGCACCC CGAGGTGCGC TGCGGCGAGG
361AGACCCGCAT CATCCCGCGC GTGCTGGCCA TGCGCCAGGC CTGGTCCAAG TCTGGCCGTG
421AGAAGCTGCG GCTGGATGAG GCGGGGGTGA CGGATGAGGT GCTGGACGCC GCCATGCAGG
481CCTTCATCCT GGAGGTGATT GCCAAGCACG GAGAGCCGGC CCGCGTGCTC TGCAACAAGG
541ACCCATTTAC GCTCAAGTCC TCGGTCTACC TGTCGCGCCT GTTCCCCAAC TCCAAGTTCC
601TGCTGATGGT GCGGGACGGC CGGGCCTCCG TGCACTCCAT GATCACGCGC AAAGTCACCA
661TTGCGGGCTT TGACCTCAGC AGCTACCGTG ACTGCCTCAC CAAGTGGAAC AAGGCCATCG
721AGGTGATGTA CGCCCAGTGC ATGGAGGTAG GCAAGGAGAA GTGCCTGCCT GTGTACTACG
781AGCAGCTGGT GCTGCACCCC AGGCGCTCAC TCAAGCTCAT CCTCGACTTC CTCGGCATCG
841CCTGGAGCGA CGCTGTCCTC CACCATGAAG ACCTCATTGG CAAGCCCGGT GGTGTCTCCC
901TGTCCAAGAT CGAGCGGTCC ACGGACCAGG TCATCAAGCC TGTTAACCTG GAAGCGCTCT
961CCAAGTGGAC TGGCCACATC CCTGGGGATG TGGTGCGGGA CATGGCCCAG ATCGCCCCCA
1021TGCTGGCTCA GCTCGGCTAT GACCCTTATG CAAACCCCCC CAACTATGGC AACCCTGACC
1081CCTTCGTCAT CAACAACACA CAGCGGGTCT TGAAAGGGGA CTATAAAACA CCAGCCAATC
1141TGAAAGGATA TTTTCAGGTG AACCAGAACA GCACCTCCTC CCACTTAGGA AGCTCGTGCC
1201CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1261aac

Download FASTA (ORF) (Full)