Construct: ORF ccsbBroadEn_01933

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016511.1_s300c1, BRDN0000385306
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TEAD2 (8463)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8463 TEAD2 TEA domain transcription fa... NM_003598.2 100% 100%
2 human 8463 TEAD2 TEA domain transcription fa... NM_001256658.2 99.3% 99.3% 466_474delCAGGTGGTC
3 human 8463 TEAD2 TEA domain transcription fa... NM_001256659.2 99.3% 99.3% 466_474delCAGGTGGTC
4 human 8463 TEAD2 TEA domain transcription fa... XM_011527403.1 99.3% 99.3% 466_474delCAGGTGGTC
5 human 8463 TEAD2 TEA domain transcription fa... NM_001256660.2 99.1% 99.1% 360_371del
6 human 8463 TEAD2 TEA domain transcription fa... NM_001256661.2 99.1% 99.1% 360_371del
7 human 8463 TEAD2 TEA domain transcription fa... XM_011527399.2 98.4% 98.4% 360_371del;478_486delCAGGTGGTC
8 human 8463 TEAD2 TEA domain transcription fa... XM_011527400.2 98.4% 98.4% 360_371del;478_486delCAGGTGGTC
9 human 8463 TEAD2 TEA domain transcription fa... XM_011527401.1 98.4% 98.4% 360_371del;478_486delCAGGTGGTC
10 human 8463 TEAD2 TEA domain transcription fa... XM_011527402.2 98.4% 98.4% 360_371del;478_486delCAGGTGGTC
11 human 8463 TEAD2 TEA domain transcription fa... XM_006723428.3 97% 97% 1036_1037ins39
12 human 8463 TEAD2 TEA domain transcription fa... XM_011527404.2 95.5% 95.5% 360_371del;478_486delCAGGTGGTC;1057_1058ins39
13 human 8463 TEAD2 TEA domain transcription fa... XM_005259334.4 91.9% 91.9% 358_359ins108
14 human 8463 TEAD2 TEA domain transcription fa... NM_001256662.2 70.2% 70.2% 0_1ins393;73_81delCAGGTGGTC
15 human 8463 TEAD2 TEA domain transcription fa... XM_006723429.2 57.1% 55.4% (many diffs)
16 human 8463 TEAD2 TEA domain transcription fa... XM_011527406.3 46.7% 45.4% (many diffs)
17 human 8463 TEAD2 TEA domain transcription fa... XM_011527405.3 46.4% 45.1% (many diffs)
18 mouse 21677 Tead2 TEA domain family member 2 NM_001285498.1 85.7% 93.2% (many diffs)
19 mouse 21677 Tead2 TEA domain family member 2 NM_011565.2 85.7% 93.2% (many diffs)
20 mouse 21677 Tead2 TEA domain family member 2 XM_006540777.2 85.7% 93.2% (many diffs)
21 mouse 21677 Tead2 TEA domain family member 2 NM_001285500.1 79.2% 85.4% (many diffs)
22 mouse 21677 Tead2 TEA domain family member 2 XM_011250842.1 48.9% 52.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1407
ORF length:
1341
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GGAACCCCGG GCTGGGGCCG CCCTGGACGA TGGCAGCGGC TGGACGGGCA
121GTGAGGAAGG CAGTGAGGAG GGTACCGGCG GCAGTGAGGG GGCTGGGGGT GACGGGGGCC
181CGGATGCAGA GGGGGTGTGG AGCCCAGACA TTGAGCAGAG CTTCCAGGAG GCCCTGGCCA
241TCTATCCACC CTGCGGCCGC CGGAAAATAA TTTTGTCTGA TGAAGGCAAG ATGTATGGTC
301GGAATGAACT GATCGCCCGC TACATCAAGC TGAGAACGGG GAAGACCCGA ACTCGAAAAC
361AGGTTTCTAG TCACATCCAG GTTTTGGCCC GAAGGAAATC AAGGGAAATC CAGTCCAAGT
421TGAAGGACCA GGTTTCCAAG GACAAGGCTT TCCAGACAAT GGCAACCATG TCCTCTGCCC
481AGCTCATCTC CGCGCCTTCT CTGCAGGCCA AACTGGGTCC CACTGGTCCT CAGGCCTCTG
541AGCTTTTCCA GTTTTGGTCT GGAGGATCTG GGCCCCCCTG GAATGTTCCA GATGTGAAGC
601CATTCTCACA GACACCGTTC ACCTTGTCAC TGACTCCCCC ATCTACTGAC CTCCCAGGGT
661ACGAGCCCCC CCAAGCCCTC TCACCCCTGC CCCCACCTAC CCCATCGCCC CCAGCCTGGC
721AGGCTCGGGG CCTGGGCACC GCCCGGTTGC AGCTGGTAGA GTTCTCAGCC TTCGTGGAAC
781CGCCAGATGC AGTTGATTCT TACCAGAGGC ACCTGTTCGT GCACATCAGC CAGCACTGCC
841CCAGCCCCGG AGCGCCGCCG CTCGAGAGTG TGGACGTCCG GCAGATCTAC GACAAATTCC
901CTGAGAAAAA GGGTGGCCTC CGAGAGCTAT ATGATCGTGG CCCCCCCCAT GCCTTCTTCC
961TGGTCAAGTT CTGGGCGGAC CTGAACTGGG GCCCAAGTGG TGAGGAGGCA GGGGCCGGTG
1021GCAGCATCAG CAGTGGTGGC TTCTACGGAG TGAGCAGCCA GTATGAGAGC CTGGAACACA
1081TGACCCTCAC CTGTTCCTCC AAGGTCTGCT CTTTTGGCAA GCAGGTGGTG GAGAAGGTGG
1141AGACGGAACG GGCCCAGCTG GAGGACGGCA GATTTGTGTA CCGCCTGCTG CGCTCGCCCA
1201TGTGCGAGTA CCTGGTGAAT TTCTTGCACA AGTTGCGGCA GCTGCCTGAG CGATACATGA
1261TGAACAGCGT CCTGGAAAAC TTCACCATCC TCCAGGTGGT GACAAACAGA GACACCCAGG
1321AACTGCTGCT CTGCACCGCC TATGTCTTCG AGGTCTCCAC CAGCGAGCGT GGGGCCCAGC
1381ATCACATTTA CCGCCTGGTC AGGGACTGCC CAACTTTCTT GTACAAAGTt ggcattataa
1441gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)