Construct: ORF ccsbBroadEn_02009

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005227.1_s300c1, BRDN0000388182
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAB11A (8766)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8766 RAB11A RAB11A, member RAS oncogene... NM_004663.5 100% 100%
2 human 9230 RAB11B RAB11B, member RAS oncogene... NM_004218.4 73% 91.2% (many diffs)
3 human 8766 RAB11A RAB11A, member RAS oncogene... NM_001206836.2 71.7% 68% 438_439ins95;465_466ins88
4 mouse 53869 Rab11a RAB11A, member RAS oncogene... NM_017382.5 95.8% 100% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
714
ORF length:
648
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG CACCCGCGAC GACGAGTACG ACTACCTCTT TAAAGTTGTC CTTATTGGAG
121ATTCTGGTGT TGGAAAGAGT AATCTCCTGT CTCGATTTAC TCGAAATGAG TTTAATCTGG
181AAAGCAAGAG CACCATTGGA GTAGAGTTTG CAACAAGAAG CATCCAGGTT GATGGAAAAA
241CAATAAAGGC ACAGATATGG GACACAGCAG GGCAAGAGCG ATATCGAGCT ATAACATCAG
301CATATTATCG TGGAGCTGTA GGTGCCTTAT TGGTTTATGA CATTGCTAAA CATCTCACAT
361ATGAAAATGT AGAGCGATGG CTGAAAGAAC TGAGAGATCA TGCTGATAGT AACATTGTTA
421TCATGCTTGT GGGCAATAAG AGTGATCTAC GTCATCTCAG GGCAGTTCCT ACAGATGAAG
481CAAGAGCTTT TGCAGAAAAG AATGGTTTGT CATTCATTGA AACTTCGGCC CTAGACTCTA
541CAAATGTAGA AGCTGCTTTT CAGACAATTT TAACAGAGAT TTACCGCATT GTTTCTCAGA
601AGCAAATGTC AGACAGACGC GAAAATGACA TGTCTCCAAG CAACAATGTG GTTCCTATTC
661ATGTTCCACC AACCACTGAA AACAAGCCAA AGGTGCAGTG CTGTCAGAAC ATCTACCCAA
721CTTTCTTGTA CAAAGTtggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)