Construct: ORF ccsbBroadEn_02046

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018320.1_s300c1, BRDN0000391716
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CPNE1 (8904)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8904 CPNE1 copine 1 NM_152925.3 100% 100%
2 human 8904 CPNE1 copine 1 NM_152926.3 100% 100%
3 human 8904 CPNE1 copine 1 NM_152927.3 100% 100%
4 human 8904 CPNE1 copine 1 NM_152928.3 100% 100%
5 human 8904 CPNE1 copine 1 NM_001198863.2 99.8% 99.8% 1236_1237insCAA
6 human 8904 CPNE1 copine 1 NM_003915.5 99% 99% 1_15del
7 human 8904 CPNE1 copine 1 NR_037188.2 75% 1_337del;1949_2148del
8 mouse 266692 Cpne1 copine I NM_170588.3 86.4% 91.4% (many diffs)
9 mouse 266692 Cpne1 copine I NM_170590.3 86.4% 91.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1677
ORF length:
1611
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CCACTGCGTG ACCTTGGTTC AGCTGTCCAT TTCCTGTGAC CATCTCATTG
121ACAAGGACAT CGGCTCCAAG TCTGACCCAC TCTGCGTCCT TTTACAGGAT GTGGGAGGGG
181GCAGCTGGGC TGAGCTTGGC CGGACTGAAC GGGTGCGGAA CTGCTCAAGC CCTGAGTTCT
241CCAAGACTCT ACAGCTTGAG TACCGCTTTG AGACAGTCCA GAAGCTACGC TTTGGAATCT
301ATGACATAGA CAACAAGACG CCAGAGCTGA GGGATGATGA CTTCCTAGGG GGTGCTGAGT
361GTTCCCTAGG ACAGATTGTG TCCAGCCAGG TACTGACTCT CCCCTTGATG CTGAAGCCTG
421GAAAACCTGC TGGGCGGGGG ACCATCACGG TCTCAGCTCA GGAATTAAAG GACAATCGTG
481TAGTAACCAT GGAGGTAGAG GCCAGAAACC TAGATAAGAA GGACTTCCTG GGAAAATCAG
541ATCCATTTCT GGAGTTCTTC CGCCAGGGTG ATGGGAAATG GCACCTGGTG TACAGATCTG
601AGGTCATCAA GAACAACCTG AACCCTACAT GGAAGCGTTT CTCAGTCCCC GTTCAGCATT
661TCTGTGGTGG GAACCCCAGC ACACCCATCC AGGTGCAATG CTCCGATTAT GACAGTGACG
721GGTCACATGA TCTCATCGGT ACCTTCCACA CCAGCTTGGC CCAGCTGCAG GCAGTCCCGG
781CTGAGTTTGA ATGCATCCAC CCTGAGAAGC AGCAGAAAAA GAAAAGCTAC AAGAACTCTG
841GAACTATCCG TGTCAAGATT TGTCGGGTAG AAACAGAGTA CTCCTTTCTG GACTATGTGA
901TGGGAGGCTG TCAGATCAAC TTCACTGTGG GCGTGGACTT CACTGGCTCC AATGGAGACC
961CCTCCTCACC TGACTCCCTA CACTACCTGA GTCCAACAGG GGTCAATGAG TACCTGATGG
1021CACTGTGGAG TGTGGGCAGC GTGGTTCAGG ACTATGACTC AGACAAGCTG TTCCCTGCAT
1081TTGGATTTGG GGCCCAGGTT CCCCCTGACT GGCAGGTCTC GCATGAATTT GCCTTGAATT
1141TCAACCCCAG TAACCCCTAC TGTGCAGGCA TCCAGGGCAT TGTGGATGCC TACCGCCAAG
1201CCCTGCCCCA AGTTCGCCTC TATGGCCCTA CCAACTTTGC ACCCATCATC AACCATGTGG
1261CCAGGTTTGC AGCCCAGGCT GCACATCAGG GGACTGCCTC GCAATACTTC ATGCTGTTGC
1321TGCTGACTGA TGGTGCTGTG ACGGATGTGG AAGCCACACG TGAGGCTGTG GTGCGTGCCT
1381CGAACCTGCC CATGTCAGTG ATCATTGTGG GTGTGGGTGG TGCTGACTTT GAGGCCATGG
1441AGCAGCTGGA CGCTGATGGT GGACCCCTGC ATACACGTTC TGGGCAGGCT GCTGCCCGCG
1501ACATTGTGCA GTTTGTACCC TACCGCCGGT TCCAGAATGC CCCTCGGGAG GCATTGGCAC
1561AGACCGTGCT CGCAGAAGTG CCCACACAAC TGGTCTCATA CTTCAGGGCC CAGGGTTGGG
1621CCCCGCTCAA GCCACTTCCA CCCTCAGCCA AGGATCCTGC ACAGGCCCCC CAGGCCTACC
1681CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
1741aac

Download FASTA (ORF) (Full)