Construct: ORF ccsbBroadEn_02215

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000656.1_s300c1, BRDN0000455815
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TESMIN (9633)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9633 TESMIN testis expressed metallothi... NM_001039656.1 100% 100%
2 human 9633 TESMIN testis expressed metallothi... NM_004923.3 60.2% 60.2% 919_1524del
3 human 9633 TESMIN testis expressed metallothi... XM_011545402.1 58.9% 58.9% 919_1557del
4 human 9633 TESMIN testis expressed metallothi... XM_011545403.2 58.9% 58.9% 919_1557del
5 human 9633 TESMIN testis expressed metallothi... XR_950115.1 54.2% 1_184del;813_814ins121;982_1349del
6 human 9633 TESMIN testis expressed metallothi... XM_017018588.1 46.2% 46.2% 630_631ins198;721_1359del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
987
ORF length:
918
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAGGAGGGC CCTCTGCCGG GCGGGCTGCC CAGCCCCGAG GATGCGATGG
121TGACGGAGCT CTTAAGCCCC GAGGGTCCGT TCGCTTCGGA GAACATCGGC CTGAAGGCCC
181CCGTGAAGTA CGAGGAGGAC GAGTTCCACG TCTTCAAAGA AGCGTACCTG GGCCCGGCGG
241ACCCCAAGGA ACCCGTCCTG CACGCGTTCA ACCCCGCGCT GGGCGCCGAC TGCAAGGGCC
301AGGTCAAGGC GAAGCTCGCG GGGGGCGACA GCGACGGCGG GGAGCTCCTC GGGGAGTACC
361CCGGGATCCC AGAGCTCAGC GCGCTGGAGG ACGTCGCGCT CCTGCAGGCC CCGCAGCCGC
421CCGCCTGCAA CGTGCACTTC CTGTCCTCGC TGCTACCCGC GCACCGCAGC CCGGCGGTGT
481TGCCCCTGGG CGCCTGGGTC CTGGAAGGAG CCTCCCACCC GGGCGTCCGC ATGATCCCAG
541TTGAAATCAA GGAAGCAGGT GGTACTACTA CAAGTAATAA TCCGGAAGAA GCAACTTTGC
601AGAATCTTCT TGCTCAGGAA TCCTGTTGCA AGTTCCCATC GTCCCAGGAA CTAGAGGATG
661CCTCCTGCTG TTCTCTTAAG AAAGATTCCA ACCCAATGGT GATATGCCAA TTGAAAGGGG
721GCACACAAAT GCTATGTATA GACAATTCTA GAACAAGAGA ACTAAAAGCA CTCCATTTGG
781TTCCTCAGTA TCAAGATCAA AATAATTATC TACAGTCAGA TGTCCCTAAA CCAATGACTG
841CTTTAGTAGG GAGATTTTTG CCAGCATCAA CAAAATTAAA TCTCATTACA CAACAACTTG
901AGGGAGCCTT ACCATCGGTA GTCAACGGGT CTGCTTTCCC CTCGGGATCA ACTCTTCCAG
961GACCACCAAA AATAACTTTG GCTGGGTTGC CAACTTTCTT GTACAAAGTT GGcattataa
1021gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)