Construct: ORF ccsbBroadEn_02225

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006522.1_s300c1, BRDN0000393311
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTI1 (9675)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9675 TTI1 TELO2 interacting protein 1 NM_001303457.2 100% 100%
2 human 9675 TTI1 TELO2 interacting protein 1 NM_014657.3 100% 100%
3 human 9675 TTI1 TELO2 interacting protein 1 XM_017028148.2 95.1% 93.7% (many diffs)
4 human 9675 TTI1 TELO2 interacting protein 1 XR_001754440.2 85.6% (many diffs)
5 human 9675 TTI1 TELO2 interacting protein 1 XR_936662.3 85.4% 1_99del;3186_3311del;3493_3823del
6 human 9675 TTI1 TELO2 interacting protein 1 XR_001754442.2 85.4% 1_99del;2601_2617del;3384_3824del
7 human 9675 TTI1 TELO2 interacting protein 1 XR_001754441.2 81.8% 1_99del;2598_2599ins149;3218_3662del
8 human 9675 TTI1 TELO2 interacting protein 1 XM_011529114.2 80.5% 75.6% 2499_2500ins149;2631_2632ins487
9 human 9675 TTI1 TELO2 interacting protein 1 XR_244159.4 80.3% 1_99del;2890_2891ins205;3162_3606del
10 human 9675 TTI1 TELO2 interacting protein 1 XR_001754443.2 79.9% (many diffs)
11 mouse 75425 Tti1 TELO2 interacting protein 1 NM_029282.1 85.2% 84.9% (many diffs)
12 mouse 75425 Tti1 TELO2 interacting protein 1 XM_006500332.2 85.2% 84.9% (many diffs)
13 mouse 75425 Tti1 TELO2 interacting protein 1 XM_011239826.2 85.2% 84.9% (many diffs)
14 mouse 75425 Tti1 TELO2 interacting protein 1 XM_006500333.3 69.9% 69.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3333
ORF length:
3267
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGTTTTTGAT ACTCCTGAGG AGGCCTTTGG TGTCTTACGT CCAGTCTGTG
121TTCAGCTCAC AAAGACCCAG ACAGTGGAGA ATGTGGAGCA TCTGCAGACA CGACTACAAG
181CTGTGAGTGA CAGTGCCCTT CAGGAACTTC AGCAGTACAT CCTCTTCCCT CTGCGATTTA
241CCCTGAAGAC CCCAGGTCCC AAAAGAGAGC GTTTGATCCA AAGTGTGGTG GAATGCCTCA
301CATTTGTCCT TTCTTCAACA TGTGTGAAAG AACAGGAGCT TCTCCAGGAA CTCTTTTCAG
361AACTCTCTGC TTGTCTGTAT TCACCCAGCT CCCAAAAACC TGCGGCTGTG TCCGAGGAGT
421TGAAATTGGC TGTGATCCAG GGACTTAGCA CATTAATGCA CTCAGCTTAT GGGGACATCA
481TTCTGACTTT TTATGAGCCC TCCATTCTGC CACGTTTAGG ATTTGCTGTA TCTTTACTGT
541TAGGCCTTGC AGAACAGGAG AAATCAAAGC AAATTAAAAT TGCTGCCTTA AAATGTTTAC
601AGGTTCTACT CTTGCAGTGT GATTGTCAGG ACCATCCAAG GTCATTGGAT GAACTTGAAC
661AAAAGCAGCT GGGGGATTTG TTTGCCTCTT TTTTACCTGG AATCTCAACT GCACTGACCA
721GGCTTATCAC AGGAGACTTT AAACAAGGTC ACAGCATTGT CGTATCTTCC CTAAAGATCT
781TTTACAAGAC AGTGAGCTTC ATTATGGCTG ATGAACAGCT CAAAAGAATC TCAAAGGTCC
841AAGCAAAACC TGCAGTTGAG CACAGAGTAG CAGAGCTGAT GGTTTACAGG GAAGCAGATT
901GGGTAAAAAA GACTGGCGAC AAGTTGACTA TCCTTATTAA AAAGATAATT GAGTGTGTTT
961CTGTTCACCC ACACTGGAAG GTGAGACTGG AACTGGTAGA ACTTGTGGAG GACCTTCTTT
1021TGAAGTGCAG TCAATCATTG GTCGAATGTG CTGGTCCCCT TCTGAAGGCC TTAGTGGGAC
1081TAGTAAATGA TGAGAGTCCT GAAATCCAAG CCCAGTGCAA TAAAGTTCTG AGACATTTTG
1141CAGATCAAAA AGTAGTGGTG GGCAACAAAG CCCTCGCTGA CATCTTGTCA GAAAGCCTGC
1201ATTCCCTTGC CACATCTCTT CCTCGCCTAA TGAACTCCCA AGATGACCAG GGCAAATTCT
1261CTACTCTTTC CTTGTTACTT GGTTATCTGA AACTCTTGGG CCCAAAAATA AACTTTGTCC
1321TCAACTCTGT GGCCCATCTC CAGCGGCTTT CCAAAGCACT CATCCAAGTT CTAGAGCTAG
1381ACGTGGCTGA CATCAAGATT GTTGAGGAAC GGCGTTGGAA CTCTGATGAT CTGAATGCTT
1441CTCCAAAGAC CTCAGCCACA CAGCCTTGGA ACCGCATCCA GAGGAGATAT TTCCGCTTCT
1501TCACTGATGA GAGAATCTTC ATGCTCTTGA GGCAGGTTTG TCAGCTACTT GGTTATTATG
1561GGAATCTTTA TTTGCTTGTG GATCACTTTA TGGAACTTTA CCATCAATCT GTGGTTTACC
1621GGAAGCAAGC TGCCATGATC CTTAATGAAC TGGTTACAGG GGCTGCTGGG CTGGAGGTTG
1681AGGATCTTCA CGAAAAACAT ATTAAAACAA ACCCAGAAGA ACTGAGAGAG ATTGTGACAT
1741CTATACTTGA AGAATACACA AGTCAAGAAA ATTGGTATTT GGTTACCTGT CTTGAAACTG
1801AGGAAATGGG AGAGGAGCTG ATGATGGAGC ACCCAGGCCT CCAAGCCATC ACGTCTGGTG
1861AACACACCTG CCAAGTTACA TCTTTTCTAG CCTTCTCAAA GCCAAGTCCC ACTATTTGCT
1921CCATGAACAG TAACATCTGG CAAATATGCA TTCAGTTGGA AGGAATTGGC CAGTTTGCAT
1981ATGCACTAGG AAAAGACTTC TGTTTGCTCT TGATGTCAGC CCTTTATCCA GTACTGGAGA
2041AGGCTGGAGA CCAAACCCTA CTCATTAGTC AGGTGGCTAC CAGCACCATG ATGGACGTTT
2101GCCGTGCTTG TGGCTACGAC TCCCTGCAGC ACCTGATCAA TCAAAATTCA GACTATTTAG
2161TGAATGGGAT CTCTTTAAAT CTGCGTCATC TGGCTCTGCA TCCTCATACC CCAAAGGTCC
2221TGGAAGTCAT GCTGCGGAAC TCAGATGCTA ACCTGCTTCC TTTGGTGGCA GATGTGGTTC
2281AAGATGTCTT GGCCACCCTG GACCAATTTT ACGATAAGAG AGCTGCTTCC TTTGTCAGCG
2341TTCTGCATGC TCTGATGGCA GCATTAGCCC AGTGGTTCCC AGACACAGGT AATCTTGGGC
2401ACCTCCAAGA GCAAAGTTTA GGAGAAGAGG GAAGTCATTT GAACCAAAGA CCAGCAGCTC
2461TTGAGAAGAG CACCACCACA GCTGAAGACA TCGAACAGTT TTTGCTGAAC TACCTCAAAG
2521AGAAGGATGT GGCAGATGGA AATGTCTCGG ATTTTGATAA TGAAGAAGAG GAACAGTCAG
2581TCCCTCCCAA AGTGGATGAG AATGACACCC GTCCAGATGT GGAGCCACCA CTGCCATTGC
2641AGATCCAAAT AGCCATGGAC GTGATGGAAC GCTGCATCCA CTTGTTGTCA GATAAAAATC
2701TGCAAATCCG CCTGAAGGTC TTGGATGTGC TGGATCTGTG TGTGGTTGTT CTTCAGTCCC
2761ACAAAAACCA GCTGCTTCCC TTGGCTCATC AGGCCTGGCC CTCGCTCGTT CACCGACTCA
2821CACGGGACGC CCCCCTGGCA GTGCTTAGAG CCTTCAAGGT TTTACGTACC CTGGGAAGCA
2881AGTGTGGTGA CTTTCTTCGC AGCCGGTTCT GCAAAGATGT CCTGCCAAAG CTGGCTGGCT
2941CCCTAGTCAC CCAGGCCCCC ATCAGTGCCA GGGCTGGACC AGTTTACTCG CACACGCTGG
3001CCTTCAAGTT GCAGCTGGCT GTCTTACAGG GCCTGGGCCC CCTCTGTGAG AGACTGGACC
3061TAGGTGAGGG TGACCTGAAT AAAGTGGCTG ATGCCTGCTT GATTTACCTC AGTGTCAAAC
3121AGCCCGTGAA ATTACAAGAG GCTGCCAGGA GCGTCTTCCT CCACTTGATG AAGGTGGACC
3181CAGACTCCAC CTGGTTCCTC CTGAACGAGC TTTACTGCCC CGTGCAGTTC ACACCTCCCC
3241ACCCCAGCCT CCACCCTGTG CAGCTGCACG GGGCCAGCGG GCAGCAGAAC CCCTACACGA
3301CCAACGTGCT CCAGCTGCTC AAGGAGCTGC AGTGCCCAAC TTTCTTGTAC AAAGTtggca
3361ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)