Construct: ORF ccsbBroadEn_02244

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012259.1_s300c1, BRDN0000385375
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PTDSS1 (9791)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9791 PTDSS1 phosphatidylserine synthase 1 NM_014754.3 100% 100%
2 human 9791 PTDSS1 phosphatidylserine synthase 1 NM_001290225.2 69.1% 69.1% 0_1ins438
3 mouse 19210 Ptdss1 phosphatidylserine synthase 1 NM_008959.3 90.6% 97.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1485
ORF length:
1419
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GTCCTGCGTG GGGAGCCGGA CCCTAAGCAA GGATGATGTG AACTACAAAA
121TGCATTTCCG GATGATCAAC GAGCAGCAAG TGGAGGACAT CACCATTGAC TTCTTCTACC
181GGCCGCATAC CATCACCCTG CTCAGCTTCA CCATCGTCAG CCTCATGTAC TTCGCCTTTA
241CCAGGGATGA CTCTGTTCCA GAAGACAACA TCTGGAGAGG CATCCTCTCT GTTATTTTCT
301TCTTTCTTAT CATCAGTGTG TTAGCTTTCC CCAATGGTCC GTTCACTCGA CCTCATCCAG
361CCTTATGGCG AATGGTTTTT GGACTCAGTG TGCTCTACTT CCTGTTCCTG GTATTCCTAC
421TCTTCCTGAA TTTCGAGCAG GTTAAATCTC TAATGTATTG GCTAGATCCA AATCTTCGAT
481ACGCCACAAG GGAAGCAGAT GTCATGGAGT ATGCTGTGAA CTGCCATGTG ATCACCTGGG
541AGAGGATTAT CAGCCACTTT GATATTTTTG CATTTGGACA TTTCTGGGGC TGGGCCATGA
601AGGCCTTGCT GATCCGTAGT TACGGTCTCT GCTGGACAAT CAGTATTACC TGGGAGCTGA
661CTGAGCTCTT CTTCATGCAT CTCCTCCCCA ATTTTGCCGA GTGCTGGTGG GATCAAGTCA
721TTCTGGACAT CCTGTTGTGC AATGGCGGTG GCATTTGGCT GGGCATGGTC GTTTGCCGGT
781TTTTAGAGAT GAGGACTTAC CACTGGGCAA GCTTCAAGGA CATTCATACC ACCACCGGGA
841AGATCAAGAG AGCTGTTCTG CAGTTCACTC CTGCTAGCTG GACCTATGTT CGATGGTTTG
901ACCCCAAATC TTCTTTTCAG AGAGTAGCTG GAGTGTACCT TTTCATGATC ATCTGGCAGC
961TGACTGAGTT GAATACCTTC TTCTTGAAGC ATATCTTTGT GTTCCAAGCC AGTCATCCAT
1021TAAGTTGGGG TAGAATTCTC TTTATTGGTG GCATCACAGC TCCCACAGTG AGACAGTACT
1081ACGCTTACCT CACCGACACA CAGTGCAAGC GCGTAGGAAC ACAATGCTGG GTGTTTGGGG
1141TCATTGGTTT CCTGGAGGCC ATTGTTTGCA TAAAATTTGG ACAAGATCTC TTCTCTAAGA
1201CCCAAATACT CTATGTTGTG CTTTGGCTTC TTTGCGTGGC TTTCACCACT TTCCTCTGTC
1261TGTACGGCAT GATTTGGTAT GCAGAACACT ATGGTCACCG AGAAAAGACC TACTCGGAGT
1321GTGAAGATGG CACCTACAGT CCAGAGATCT CCTGGCATCA CAGGAAAGGG ACAAAAGGTT
1381CTGAAGACAG CCCACCCAAG CATGCAGGCA ACAACGAAAG CCATTCTTCC AGGAGAAGGA
1441ATCGGCATTC CAAGTCAAAA GTCACCAATG GCGTTGGAAA GAAATGCCCA ACTTTCTTGT
1501ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)