Construct: ORF ccsbBroadEn_02429

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015356.1_s300c1, BRDN0000395673
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM14 (10432)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10432 RBM14 RNA binding motif protein 14 NM_006328.4 100% 100%
2 human 10432 RBM14 RNA binding motif protein 14 NM_001198836.2 22.9% 22.7% (many diffs)
3 human 100526737 RBM14-RBM4 RBM14-RBM4 readthrough NM_001198846.1 17.1% 16.8% (many diffs)
4 human 10432 RBM14 RNA binding motif protein 14 NM_001198837.2 17.1% 16.7% (many diffs)
5 mouse 56275 Rbm14 RNA binding motif protein 14 NM_019869.3 93.7% 98.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2073
ORF length:
2007
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GATATTCGTG GGCAACGTCG ACGGGGCGGA TACGACTCCG GAGGAGCTGG
121CAGCCCTCTT TGCGCCCTAC GGCACGGTCA TGAGCTGCGC CGTCATGAAA CAGTTCGCCT
181TCGTGCACAT GCGCGAGAAC GCGGGCGCGC TGCGCGCCAT CGAAGCCCTG CACGGCCACG
241AGCTGCGGCC GGGGCGCGCG CTCGTGGTGG AGATGTCGCG CCCAAGGCCT CTTAATACTT
301GGAAGATTTT CGTGGGCAAT GTGTCGGCTG CATGCACGAG CCAGGAACTG CGCAGCCTCT
361TCGAGCGCCG CGGACGCGTC ATCGAGTGTG ACGTGGTGAA AGACTACGCG TTTGTTCACA
421TGGAGAAGGA AGCAGATGCC AAAGCCGCAA TCGCGCAGCT CAACGGCAAA GAAGTGAAGG
481GCAAGCGCAT CAACGTGGAA CTCTCCACCA AGGGTCAGAA GAAGGGGCCT GGCCTGGCTG
541TCCAGTCTGG GGACAAGACC AAGAAACCAG GGGCTGGGGA TACGGCCTTC CCTGGAACTG
601GTGGCTTCTC TGCCACCTTC GACTACCAGC AGGCTTTTGG CAACAGCACT GGTGGCTTTG
661ATGGGCAAGC CCGTCAGCCC ACACCACCCT TCTTTGGTCG CGACCGCAGC CCTCTGCGCC
721GTTCACCTCC CCGAGCCTCT TATGTGGCTC CTCTGACGGC CCAGCCAGCT ACCTACCGGG
781CCCAGCCGTC CGTGTCACTG GGAGCTGCCT ACAGGGCCCA GCCTTCTGCC TCTTTGGGTG
841TTGGCTATCG GACTCAGCCC ATGACAGCCC AGGCAGCCTC TTACCGCGCT CAGCCCTCTG
901TCTCCCTTGG GGCACCATAC AGGGGCCAGC TGGCTAGTCC TAGCTCCCAG TCTGCTGCAG
961CTTCTTCACT CGGCCCATAT GGTGGAGCCC AGCCCTCAGC CTCGGCCCTT TCCTCCTATG
1021GGGGTCAGGC AGCTGCAGCT TCTTCGCTCA ACTCCTATGG GGCTCAGGGT TCCTCCCTTG
1081CCTCCTATGG TAACCAGCCA TCCTCTTACG GCGCCCAGGC TGCCTCTTCC TATGGGGTTC
1141GTGCAGCTGC TTCTTCCTAC AACACCCAGG GAGCAGCTTC CTCCTTAGGC TCCTACGGGG
1201CTCAGGCAGC CTCCTATGGG GCCCAGTCTG CAGCCTCCTC ACTAGCTTAT GGAGCCCAGG
1261CAGCTTCATA TAATGCCCAG CCCTCGGCCT CTTACAATGC CCAGTCTGCC CCATATGCTG
1321CACAGCAGGC TGCTTCCTAC TCTTCCCAAC CTGCTGCCTA TGTGGCACAG CCAGCCACAG
1381CTGCTGCCTA TGCCAGCCAG CCAGCAGCCT ACGCCGCACA AGCCACTACC CCAATGGCTG
1441GCTCCTATGG GGCCCAGCCG GTTGTGCAGA CCCAGCTGAA TAGTTACGGG GCCCAAGCAT
1501CAATGGGCCT TTCAGGCTCC TATGGGGCTC AGTCGGCTGC TGCGGCCACT GGCTCCTATG
1561GTGCCGCAGC AGCCTACGGG GCCCAACCTT CTGCCACCCT GGCAGCTCCT TACCGCACTC
1621AGTCATCAGC CTCATTGGCT GCTTCCTATG CTGCCCAGCA GCATCCCCAG GCTGCTGCCT
1681CCTACCGCGG CCAGCCAGGC AATGCCTACG ATGGGGCAGG TCAGCCGTCT GCAGCCTACC
1741TGTCCATGTC CCAGGGGGCC GTTGCCAACG CCAACAGCAC CCCGCCGCCC TATGAGCGTA
1801CCCGCCTCTC CCCACCCCGG GCCAGCTACG ACGATCCCTA CAAAAAGGCT GTCGCCATGT
1861CGAAAAGGTA TGGTTCCGAC CGGCGTTTAG CCGAGCTCTC TGATTACCGC CGTTTATCAG
1921AGTCGCAGCT TTCGTTCCGC CGCTCGCCGA CAAAGTCCTC GCTGGATTAC CGTCGCCTGC
1981CCGATGCCCA TTCCGATTAC GCACGCTATT CGGGCTCCTA TAATGATTAC CTGCGGGCGG
2041CTCAGATGCA CTCTGGCTAC CAGCGCCGCA TGTACCCAAC TTTCTTGTAC AAAGTtggca
2101ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)

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