Construct: ORF ccsbBroadEn_02567

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016297.1_s300c1, BRDN0000393189
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
C11orf58 (10944)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10944 C11orf58 chromosome 11 open reading ... NM_014267.6 100% 100%
2 human 10944 C11orf58 chromosome 11 open reading ... XM_017017143.2 75.9% 75.9% 0_1ins132
3 mouse 56372 1110004F10Rik RIKEN cDNA 1110004F10 gene NM_019772.2 86.7% 95% (many diffs)
4 mouse 56372 1110004F10Rik RIKEN cDNA 1110004F10 gene XM_011241867.1 76.8% 83.6% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
615
ORF length:
549
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TGCTGCCAGA GAGTCTCACC CGCATGGGGT GAAGCGTTCA GCCTCCCCAG
121ACGACGATCT GGGATCTAGC AATTGGGAGG CAGCAGACTT GGGTAATGAA GAGAGAAAAC
181AAAAGTTCTT GAGACTTATG GGTGCAGGAA AGAAAGAACA TACTGGTCGT CTTGTTATAG
241GAGATCACAA ATCAACATCT CACTTCCGAA CCGGGGAAGA AGACAAGAAA ATTAATGAAG
301AACTGGAGTC TCAATATCAG CAAAGTATGG ACAGTAAATT ATCAGGAAGA TATCGGCGAC
361ATTGTGGACT TGGCTTCAGT GAGGTAGAAG ACCATGATGG AGAAGGTGAT GTGGCTGGAG
421ATGATGATGA TGACGATGAT GATTCACCTG ATCCTGAAAG TCCAGATGAT TCTGAAAGCG
481ATTCAGAGTC AGAGAAAGAA GAATCTGCTG AAGAACTCCA AGCTGCTGAG CACCCTGATG
541AAGTGGAGGA TCCCAAAAAC AAAAAAGATG CAAAAAGCAA TTATAAAATG ATGTTTGTTA
601AATCCAGTGG TTCATACCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
661tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)