Construct: ORF ccsbBroadEn_02568

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002283.1_s300c1, BRDN0000397467
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KDELR1 (10945)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10945 KDELR1 KDEL endoplasmic reticulum ... NM_006801.3 100% 100%
2 mouse 68137 Kdelr1 KDEL (Lys-Asp-Glu-Leu) endo... NM_133950.2 91.1% 99.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
702
ORF length:
636
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA TCTCTTCCGA TTCCTGGGAG ACCTCTCCCA CCTCCTCGCC ATCATCTTGC
121TACTGCTCAA AATCTGGAAG TCCCGCTCGT GCGCCGGAAT TTCAGGGAAG AGCCAGGTCC
181TGTTTGCTGT GGTGTTCACT GCCCGATATC TGGACCTCTT CACCAACTAC ATCTCACTCT
241ACAACACGTG TATGAAGGTG GTCTACATAG CCTGCTCCTT CACCACGGTC TGGTTGATTT
301ATAGCAAGTT CAAAGCTACT TACGATGGGA ACCATGACAC GTTCAGAGTG GAGTTCCTGG
361TCGTTCCCAC AGCCATTCTG GCGTTCCTGG TCAATCATGA CTTCACCCCT CTGGAGATCC
421TCTGGACCTT CTCCATCTAC CTGGAGTCAG TGGCCATCTT GCCGCAGCTG TTCATGGTGA
481GCAAGACCGG CGAGGCGGAG ACCATCACCA GCCACTACTT GTTTGCGCTA GGCGTTTACC
541GCACGCTCTA TCTCTTCAAC TGGATCTGGC GCTACCATTT CGAGGGCTTC TTCGACCTCA
601TCGCCATTGT GGCAGGCCTG GTCCAGACAG TCCTCTACTG CGATTTCTTC TACCTCTATA
661TCACCAAAGT CCTAAAGGGG AAGAAGTTGA GTTTGCCGGC ATACCCAACT TTCTTGTACA
721AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)