Construct: ORF ccsbBroadEn_02579

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011170.1_s300c1, BRDN0000397387
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
YWHAQ (10971)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10971 YWHAQ tyrosine 3-monooxygenase/tr... NM_006826.4 100% 100%
2 mouse 22630 Ywhaq tyrosine 3-monooxygenase/tr... NM_011739.3 93.7% 99.5% (many diffs)
3 mouse 666202 Gm7977 predicted gene 7977; tyrosi... NR_040408.1 86.5% (many diffs)
4 mouse 100039786 Gm2423 predicted gene 2423 XR_873139.1 46.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
801
ORF length:
735
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA GAAGACTGAG CTGATCCAGA AGGCCAAGCT GGCCGAGCAG GCCGAGCGCT
121ACGACGACAT GGCCACCTGC ATGAAGGCAG TGACCGAGCA GGGCGCCGAG CTGTCCAACG
181AGGAGCGCAA CCTGCTCTCC GTGGCCTACA AGAACGTGGT CGGGGGCCGC AGGTCCGCCT
241GGAGGGTCAT CTCTAGCATC GAGCAGAAGA CCGACACCTC CGACAAGAAG TTGCAGCTGA
301TTAAGGACTA TCGGGAGAAA GTGGAGTCCG AGCTGAGATC CATCTGCACC ACGGTGCTGG
361AATTGTTGGA TAAATATTTA ATAGCCAATG CAACTAATCC AGAGAGTAAG GTCTTCTATC
421TGAAAATGAA GGGTGATTAC TTCCGGTACC TTGCTGAAGT TGCGTGTGGT GATGATCGAA
481AACAAACGAT AGATAATTCC CAAGGAGCTT ACCAAGAGGC ATTTGATATA AGCAAGAAAG
541AGATGCAACC CACACACCCA ATCCGCCTGG GGCTTGCTCT TAACTTTTCT GTATTTTACT
601ATGAGATTCT TAATAACCCA GAGCTTGCCT GCACGCTGGC TAAAACGGCT TTTGATGAGG
661CCATTGCTGA ACTTGATACA CTGAATGAAG ACTCATACAA AGACAGCACC CTCATCATGC
721AGTTGCTTAG AGACAACCTA ACACTTTGGA CATCAGACAG TGCAGGAGAA GAATGTGATG
781CGGCAGAAGG GGCTGAAAAC TACCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
841attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)