Construct: ORF ccsbBroadEn_02618

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018341.1_s300c1, BRDN0000388479
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DIDO1 (11083)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11083 DIDO1 death inducer-obliterator 1 NM_022105.4 100% 100%
2 human 11083 DIDO1 death inducer-obliterator 1 NM_080796.3 100% 100%
3 human 11083 DIDO1 death inducer-obliterator 1 NM_001193370.2 46.5% 44.8% (many diffs)
4 human 11083 DIDO1 death inducer-obliterator 1 NM_080797.4 46.5% 44.8% (many diffs)
5 human 11083 DIDO1 death inducer-obliterator 1 NM_001193369.2 24.7% 23.8% (many diffs)
6 human 11083 DIDO1 death inducer-obliterator 1 NM_033081.2 24.7% 23.8% (many diffs)
7 human 11083 DIDO1 death inducer-obliterator 1 XM_011528509.2 24.7% 23.8% (many diffs)
8 human 11083 DIDO1 death inducer-obliterator 1 XM_011528504.1 24.3% 23.4% (many diffs)
9 human 11083 DIDO1 death inducer-obliterator 1 XM_011528505.2 24.3% 23.4% (many diffs)
10 human 11083 DIDO1 death inducer-obliterator 1 XM_011528507.1 24.3% 23.4% (many diffs)
11 human 11083 DIDO1 death inducer-obliterator 1 XM_011528508.1 24.3% 23.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1752
ORF length:
1686
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA CGACAAAGGC GACCCGAGCA ATGAGGAGGC ACCTAAGGCC ATCAAACCCA
121CCAGCAAAGA GTTCAGGAAA ACATGGGGTT TTCGAAGGAC CACTATCGCC AAGCGAGAGG
181GCGCAGGGGA CGCGGAGGCT GACCCACTGG AGCCGCCACC CCCACAGCAG CAGCTGGGCC
241TGTCCCTGCG GCGCAGTGGG AGGCAGCCCA AGCGCACTGA GCGCGTGGAG CAGTTCCTGA
301CCATTGCGCG GCGCCGCGGC AGGAGGAGCA TGCCTGTCTC CCTGGAGGAT TCTGGTGAGC
361CCACGTCCTG CCCCGCCACA GACGCCGAGA CAGCCTCCGA GGGCAGCGTG GAAAGCGCTT
421CTGAGACCAG AAGCGGCCCC CAGTCTGCTT CCACAGCTGT GAAGGAACGA CCAGCCTCTT
481CTGAAAAGGT GAAAGGAGGG GATGACCACG ATGACACCTC CGATAGTGAC AGCGATGGCC
541TGACCTTGAA AGAGCTTCAG AATCGCCTTC GCAGGAAGCG GGAACAGGAG CCCACTGAGA
601GGCCCCTGAA AGGGATCCAG AGTCGCCTGC GGAAGAAGCG CCGGGAGGAG GGTCCCGCCG
661AGACTGTGGG CTCCGAGGCC AGTGACACTG TGGAGGGCGT CCTGCCCAGT AAGCAGGAGC
721CCGAGAACGA TCAGGGGGTT GTGTCCCAGG CTGGGAAAGA TGACAGAGAG AGTAAGTTGG
781AGGGAAAGGC GGCTCAGGAC ATCAAAGATG AGGAGCCTGG AGACTTGGGC CGACCGAAGC
841CTGAATGTGA GGGTTACGAC CCCAACGCCC TGTATTGCAT TTGCCGCCAG CCTCACAACA
901ACAGGTTTAT GATTTGCTGT GACCGCTGTG AAGAATGGTT TCATGGCGAT TGTGTGGGCA
961TTTCTGAGGC TCGAGGGAGG CTTTTGGAAA GGAATGGGGA AGACTATATC TGCCCAAACT
1021GCACCATTCT GCAAGTGCAG GATGAGACTC ATTCAGAAAC GGCAGATCAG CAGGAAGCTA
1081AATGGAGACC TGGAGATGCT GATGGCACCG ATTGTACAAG TATAGGAACA ATAGAGCAGA
1141AGTCTAGCGA AGACCAAGGG ATAAAGGGTA GAATTGAGAA AGCTGCAAAT CCAAGTGGCA
1201AGAAGAAACT CAAGATCTTC CAGCCTGTGA TAGAGGCGCC TGGTGCCTCA AAATGTATTG
1261GCCCCGGGTG CTGTCACGTG GCGCAGCCCG ACTCGGTGTA CTGCAGTAAT GACTGTATCC
1321TCAAACACGC CGCAGCGACA ATGAAGTTTC TAAGCTCAGG TAAAGAACAG AAGCCAAAGC
1381CTAAAGAAAA GATGAAGATG AAGCCAGAGA AGCCCAGTCT TCCGAAATGC GGTGCTCAGG
1441CAGGTATTAA AATCTCTTCT GTGCACAAGA GACCAGCTCC AGAAAAAAAA GAGACCACAG
1501TGAAGAAGGC AGTGGTGGTC CCTGCGCGGA GTGAAGCACT CGGGAAGGAA GCAGCTTGTG
1561AGAGCAGCAC GCCGTCGTGG GCGAGCGATC ACAATTACAA TGCAGTAAAG CCAGAAAAGA
1621CTGCTGCTCC CTCGCCGTCA CTGTTGTATA AATGTATGTA TCACCTAGGG GTTGGCCTCC
1681TGGACCCCTC CCGTTCTTTC TGGATAGCCA TCCCCTGGGC CTGTCCAGGA CTGGGAGTTG
1741CAGCTTTGTG TTACCCAACT TTCTTGTACA AAGTtggcat tataagaaag cattgcttat
1801caatttgttg caacgaac

Download FASTA (ORF) (Full)