Construct: ORF ccsbBroadEn_02852

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014362.1_s300c1, BRDN0000395481
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RAD54B (25788)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25788 RAD54B RAD54 homolog B NM_012415.3 100% 100%
2 human 25788 RAD54B RAD54 homolog B NM_001205263.2 79.7% 79.7% 0_1ins552
3 human 25788 RAD54B RAD54 homolog B NM_001205262.3 12.3% 11.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2796
ORF length:
2730
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG ACGATCTGCA GCACCAAGTC AGTTGCAGGG GAATTCCTTC AAAAAACCAA
121AATTTATACC TCCAGGAAGA AGTAATCCAG GTCTGAATGA AGAGATTACA AAACTGAATC
181CAGATATAAA ATTATTTGAG GGTGTTGCAA TTAATAACAC CTTTCTCCCG TCACAAAATG
241ATCTTAGAAT ATGCAGTTTA AATCTGCCTA GTGAAGAAAG TACTAGAGAA ATCAATAACA
301GAGATAATTG CAGTGGAAAA TATTGTTTTG AAGCACCTAC ACTGGCAACA TTAGATCCAC
361CTCATACAGT TCATTCGGCT CCTAAAGAAG TAGCAGTGTC CAAGGAACAA GAAGAGAAAT
421CTGATAGCCT AGTTAAATAT TTCAGTGTTG TTTGGTGTAA GCCTTCAAAG AAAAAACATA
481AAAAGTGGGA AGGTGATGCT GTTCTTATTG TAAAAGGAAA GTCATTTATA TTAAAGAATT
541TGGAAGGCAA AGACATTGGA AGAGGCATTG GTTATAAATT CAAAGAGCTT GAAAAGATTG
601AAGAGGGCCA AACACTGATG ATTTGTGGAA AAGAAATAGA AGTCATGGGT GTAATCTCTC
661CAGATGACTT CAGCAGTGGC AGGTGTTTTC AGCTTGGAGG AGGAAGTACT GCTATCTCGC
721ATTCTTCTCA GGTTGCCAGG AAATGTTTCT CTAACCCTTT CAAAAGTGTT TGTAAACCAA
781GTTCAAAGGA AAATAGACAG AATGATTTCC AAAATTGCAA ACCACGCCAT GACCCATATA
841CGCCAAATTC CCTCGTTATG CCACGACCAG ATAAGAATCA CCAGTGGGTA TTCAATAAGA
901ACTGTTTCCC TCTTGTGGAT GTAGTGATTG ATCCTTACCT TGTATATCAT CTTCGACCAC
961ATCAGAAAGA AGGAATCATA TTCCTTTATG AATGTGTAAT GGGAATGAGA ATGAATGGCA
1021GATGTGGAGC TATTCTTGCT GATGAAATGG GTTTAGGGAA GACATTGCAA TGTATTTCGC
1081TCATCTGGAC CCTGCAGTGT CAGGGACCCT ATGGAGGCAA GCCAGTAATA AAGAAGACAC
1141TAATTGTCAC ACCTGGAAGC TTGGTGAATA ATTGGAAGAA AGAATTTCAA AAATGGCTAG
1201GAAGTGAAAG GATCAAGATA TTTACTGTTG ATCAGGACCA CAAAGTTGAA GAATTCATCA
1261AGTCTATATT TTATTCTGTT CTTATTATCA GTTATGAAAT GTTACTTCGT TCCCTGGATC
1321AAATTAAGAA TATAAAATTT GATCTTCTAA TCTGTGACGA GGGGCATCGT TTGAAGAACA
1381GTGCCATTAA GACAACTACA GCCCTCATTA GCCTTTCTTG TGAGAAAAGA ATAATTCTAA
1441CTGGTACTCC AATTCAGAAT GATCTGCAAG AATTTTTTGC ATTAATTGAT TTTGTAAATC
1501CAGGAATATT AGGCTCTTTG TCATCTTATA GGAAAATATA TGAAGAACCC ATCATTTTAT
1561CGAGAGAACC TTCTGCTTCT GAGGAAGAAA AGGAGTTAGG AGAAAGAAGA GCAGCTGAAC
1621TTACTTGCCT CACTGGACTC TTTATCCTTA GAAGAACCCA AGAAATTATA AATAAATATC
1681TCCCACCTAA AATAGAGAAT GTTGTCTTTT GCCGACCAGG AGCACTACAG ATTGAGCTTT
1741ATCGAAAGCT GTTAAATTCT CAGGTTGTCA GGTTCTGCCT TCAAGGGTTG TTGGAAAATA
1801GTCCCCATCT AATATGTATA GGAGCTCTTA AAAAACTGTG CAATCACCCC TGCCTTTTGT
1861TCAACTCTAT AAAGGAAAAG GAATGTAGCT CAACTTGTGA TAAAAATGAA GAAAAGAGTC
1921TATACAAAGG CTTGCTAAGT GTGTTTCCTG CTGACTACAA CCCTCTCCTG TTTACTGAAA
1981AGGAGTCAGG AAAACTACAG GTGTTGTCCA AGCTCTTAGC GGTTATCCAC GAACTTCGAC
2041CTACTGAAAA GGTGGTGTTG GTATCCAACT ATACACAAAC CTTGAACATT TTACAAGAAG
2101TATGTAAGCG TCATGGATAT GCTTATACAA GACTTGATGG ACAAACACCA ATCTCTCAAA
2161GGCAGCAGAT TGTTGATGGC TTTAACAGTC AACACTCTTC TTTTTTTATT TTTTTGTTAA
2221GTTCAAAAGC TGGTGGTGTA GGACTTAACC TCATTGGAGG ATCTCACTTA ATTCTCTATG
2281ACATTGATTG GAATCCAGCC ACTGACATTC AGGCAATGTC TAGAGTATGG AGAGATGGTC
2341AGAAATATCC TGTACATATT TACAGACTCC TAACTACAGG TACAATAGAA GAAAAGATCT
2401ATCAAAGGCA GATCAGTAAG CAAGGTCTTT GTGGGGCAGT TGTCGACCTC ACCAAGACAT
2461CTGAACATAT TCAGTTTTCA GTAGAAGAAC TTAAAAATTT GTTCACATTA CATGAAAGTT
2521CAGATTGTGT TACTCATGAT CTGCTTGACT GTGAGTGTAC AGGAGAAGAA GTTCATACAG
2581GTGATTCGTT GGAAAAATTC ATTGTCTCTA GAGATTGTCA GCTTGGTCCA CATCACCAGA
2641AATCTAACTC CCTGAAACCT CTTTCTATGT CCCAGCTGAA GCAATGGAAA CATTTTTCTG
2701GAGATCATTT AAATCTTACA GATCCTTTTC TTGAAAGAAT AACAGAAAAT GTGTCATTCA
2761TTTTTCAGAA TATAACCACT CAAGCTACTG GCACATACCC AACTTTCTTG TACAAAGTtg
2821gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)