Construct: ORF ccsbBroadEn_02975

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001347.1_s300c1, BRDN0000457338
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RANBP6 (26953)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26953 RANBP6 RAN binding protein 6 NM_012416.4 100% 100%
2 human 26953 RANBP6 RAN binding protein 6 NM_001243202.2 68.1% 68.1% 193_194ins1056
3 human 26953 RANBP6 RAN binding protein 6 XM_017014624.1 62.6% 62.3% (many diffs)
4 human 26953 RANBP6 RAN binding protein 6 NM_001243203.2 5.4% 4.1% (many diffs)
5 mouse 240614 Ranbp6 RAN binding protein 6 NM_177721.4 91.1% 96.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3384
ORF length:
3315
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCGGCAACC GCGTCTGCAG GGGTGCCGGC GACCGTGTCA GAAAAGCAAG
121AGTTTTACCA GCTTCTGAAG AACCTGATCA ATCCAAGCTG TATGGTGCGG AGGCAAGCAG
181AGGAAATCTA TGAAAATATC CCAGGTCTGT GTAAGACTAC CTTCCTCTTA GATGCCGTCA
241GAAATAGAAG AGCAGGTTAT GAGGTGAGAC AAATGGCTGC CGCACTGCTA CGACGGCTTT
301TGTCCTCTGG GTTTGAGGAG GTTTATCCAA ATCTGCCTGC TGATGTTCAG AGAGATGTCA
361AGATTGAACT GATTCTGGCT GTTAAGTTAG AAACACATGC TAGCATGAGG AAAAAACTTT
421GTGATATTTT TGCAGTGCTG GCCAGGAATT TGATAGATGA GGATGGCACT AACCACTGGC
481CGGAAGGTCT GAAGTTTCTT ATTGATTCAA TCTACTCCAA AAATGTGGTT CTATGGGAAG
541TTGCACTTCA CGTTTTCTGG CACTTTCCTG GGATTTTTGG GACCCAAGAG CGGCATGATT
601TGGATATCAT CAAACGGTTG TTGGACCAGT GTATTCAAGA TCAAGAACAT CCAGCAATCA
661GGACATTATC CGCTAGAGCT GCAGCTGCAT TTGTACTTGC TAATGAGAAT AATATTGCTC
721TTTTCAAAGA CTTTGCAGAC TTGCTTCCTG GAATCTTACA GGCTGTGAAT GACTCATGCT
781ACCAGGATGA TGATTCAGTG CTAGAATCCC TTGTTGAGAT TGCAGATACC GTACCTAAGT
841ACTTGGGTCC TTATTTAGAA GATACTCTAC AGTTGAGTTT GAAGTTATGT GGAGACTCTA
901GGCTTAGTAA TCTGCAGCGC CAGCTGGCCC TCGAAGTTAT AGTGACCTTG TCTGAAACTG
961CCACTCCGAT GTTGAAAAAA CATACAAATA TTATTGCACA GGCAGTTCCT CATATATTAG
1021CAATGATGGT TGATCTACAA GATGATGAGG ACTGGGTAAA TGCTGATGAA ATGGAAGAAG
1081ATGATTTTGA CAGCAATGCA GTTGCTGCGG AGAGTGCACT AGACAGACTG GCTTGTGGGC
1141TTGGTGGAAA AGTTGTTTTA CCAATGACCA AGGAGCATAT CATGCAGATG CTTCAGAGCC
1201CTGACTGGAA GTATCGACAT GCTGGATTAA TGGCCTTATC TGCCATTGGA GAAGGATGCC
1261ATCAACAAAT GGAATCAATT CTAGATGAAA CAGTTAACTC CGTTTTGCTT TTTCTTCAGG
1321ATCCTCATCC AAGGGTGAGG GCTGCAGCCT GTACTACACT TGGACAGATG GCTACAGATT
1381TTGCACCTAA TTTCCAAAAG AAATTTCATG AAACAGTGAT TGCAGCTCTG TTACGTACCA
1441TGGAAAATCA AGGTAATCAG CGTGTGCAAT CACATGCAGC TTCTGCTCTT ATTATTTTTA
1501TTGAAGACTG CCCTAAATCA TTGCTAGTTC TATATGTGGA TAGTATGGTG AAAAATCTAC
1561ATTCCGTCTT GGTGATTAAA CTTCAAGAGT TGATTCGGAA TGGAACTAAG TTGGCTTTGG
1621AACAACTTGT GACAACCATT GCATCAGTTG CAGATACAAT AGAAGAAAAA TTTGTCCCAT
1681ATTATGATAT ATTCATGCCC TCACTAAAGC ACATTGTTGA GCTTGCTGTT CAGAAGGAAC
1741TCAAGCTTCT GAGAGGAAAA ACTATCGAGT GCATTAGCCA TATTGGTCTT GCTGTTGGGA
1801AGGAAAAATT TATGCAAGAT GCATCAAATG TGATGCAGCT GTTGTTGAAG ACACAATCAG
1861ACTTAAATAA TATGGAAGAT GATGACCCTC AGACCTCTTA CATGGTTTCA GCATGGGCTA
1921GAATGTGTAA AATTCTTGGA AAAGATTTTC AACAGTACCT TCCACTGGTT ATCGAGCCTC
1981TTATTAAGAC TGCTTCAGCT AAACCTGATG TTGCTCTCTT AGACACACAG GATGTGGAAA
2041ATATGAGTGA CGATGATGGC TGGCAATTTG TAAATCTTGG AGACCAGCAG AGTTTTGGAA
2101TTAAAACTTC AGGACTTGAA GCAAAAGCAA CTGCTTGCCA AATGTTGGTT TACTATGCTA
2161AGGAGTTAAG GGAAGGGTTT GTGGAATATA CAGAACAAGT TGTGAAGCTG ATGGTTCCTT
2221TACTGAAATT TTATTTCCAT GACAATGTTC GAGTGGCAGC AGCAGAGTCC ATGCCTTTTC
2281TCCTGGAATG TGCAAGAATT CGTGGCCCAG AGTATCTTGC ACAGATGTGG CAATTCATAT
2341GTGACCCCTT AATCAAGGCT ATTGGTACTG AACCAGATAC AGATGTGCTC TCAGAAATAA
2401TGAATTCTTT TGCAAAGTCC ATTGAAGTTA TGGGAGATGG TTGCCTTAAT GATGAACACT
2461TGGAAGAACT GGGAGGAATA CTGAAAGCAA AACTTGAAGG GCACTTTAAA AACCAAGAAT
2521TGAGACAGGT GAAAAGACAG GAAGAAAACT ATGATCAACA GGTTGAGATG TCTCTGCAAG
2581ATGAGGATGA ATGTGATGTT TATATTCTGA CCAAAGTATC AGATATTTTG CACTCATTAT
2641TTAGTACTTA TAAGGAAAAG ATTTTACCAT GGTTTGAACA ACTACTTCCA TTAATTGTAA
2701ATCTAATTTG TTCAAGTAGG CCATGGCCAG ACAGACAGTG GGGATTGTGC ATATTTGATG
2761ACATCATAGA GCACTGCAGT CCAACTTCAT TTAAATATGT AGAATATTTT CGGTGGCCAA
2821TGCTACTAAA TATGCGAGAT AACAACCCTG AAGTCAGGCA AGCTGCTGCT TATGGCCTGG
2881GTGTCATGGC ACAGTTTGGT GGAGATGATT ATCGTTCTTT ATGTTCAGAA GCTGTTCCAC
2941TTCTGGTAAA AGTTATTAAG TGTGCAAATT CCAAAACCAA AAAAAATGTC ATTGCTACAG
3001AGAACTGTAT CTCAGCAATA GGGAAGATTT TGAAGTTTAA GCCTAACTGT GTAAATGTAG
3061ATGAAGTTCT TCCACACTGG TTATCATGGC TTCCACTGCA TGAAGATAAA GAGGAAGCTA
3121TTCAGACTTT GAGTTTTCTC TGTGACCTAA TTGAAAGTAA CCACCCAGTT GTAATTGGTC
3181CAAATAATTC CAATCTTCCC AAAATAATCA GTATAATTGC AGAAGGAAAA ATTAATGAGA
3241CTATTAACTA TGAGGATCCT TGTGCCAAAC GCCTAGCTAA TGTCGTGCGT CAGGTACAGA
3301CTTCTGAAGA TTTATGGTTG GAATGTGTAT CACAACTTGA TGATGAACAG CAGGAAGCCT
3361TACAGGAGTT GCTAAATTTT GCTTTGCCAA CTTTCTTGTA CAAAGTTGGc attataagaa
3421agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)