Construct: ORF ccsbBroadEn_03152

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003367.1_s300c1, BRDN0000396255
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AK3 (50808)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 50808 AK3 adenylate kinase 3 NM_016282.4 100% 100%
2 human 50808 AK3 adenylate kinase 3 NM_001199852.2 82.3% 82.3% 150_151ins120
3 human 50808 AK3 adenylate kinase 3 NM_001199853.1 69.1% 69.1% 0_1ins210
4 human 50808 AK3 adenylate kinase 3 NM_001199855.1 69.1% 69.1% 0_1ins210
5 human 50808 AK3 adenylate kinase 3 NM_001199856.1 69.1% 69.1% 0_1ins210
6 mouse 56248 Ak3 adenylate kinase 3 NM_021299.1 88.8% 92.5% (many diffs)
7 mouse 56248 Ak3 adenylate kinase 3 XM_006527222.3 71.7% 64.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
747
ORF length:
681
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GGCGTCCGCG CGGCTGCTGC GAGCGGTGAT CATGGGGGCC CCGGGCTCGG
121GCAAGGGCAC CGTGTCGTCG CGCATCACTA CACACTTCGA GCTGAAGCAC CTCTCCAGCG
181GGGACCTGCT CCGGGACAAC ATGCTGCGGG GCACAGAAAT TGGCGTGTTA GCCAAGGCTT
241TCATTGACCA AGGGAAACTC ATCCCAGATG ATGTCATGAC TCGGCTGGCC CTTCATGAGC
301TGAAAAATCT CACCCAGTAT AGCTGGCTGT TGGATGGTTT TCCAAGGACA CTTCCACAGG
361CAGAAGCCCT AGATAGAGCT TATCAGATCG ACACAGTGAT TAACCTGAAT GTGCCCTTTG
421AGGTCATTAA ACAACGCCTT ACTGCTCGCT GGATTCATCC CGCCAGTGGC CGAGTCTATA
481ACATTGAATT CAACCCTCCC AAAACTGTGG GCATTGATGA CCTGACTGGG GAGCCTCTCA
541TTCAGCGTGA GGATGATAAA CCAGAGACGG TTATCAAGAG ACTAAAGGCT TATGAAGACC
601AAACAAAGCC AGTCCTGGAA TATTACCAGA AAAAAGGGGT GCTGGAAACA TTCTCCGGAA
661CAGAAACCAA CAAGATTTGG CCCTATGTAT ATGCTTTCCT ACAAACTAAA GTTCCACAAA
721GAAGCCAGAA AGCTTCAGTT ACTCCATGCC CAACTTTCTT GTACAAAGTt ggcattataa
781gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)