Construct: ORF ccsbBroadEn_03326

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005304.1_s300c1, BRDN0000387199
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OSER1 (51526)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51526 OSER1 oxidative stress responsive... NM_016470.8 100% 100%
2 human 51526 OSER1 oxidative stress responsive... XM_011528853.3 100% 100%
3 human 51526 OSER1 oxidative stress responsive... XM_017027873.1 100% 100%
4 human 51526 OSER1 oxidative stress responsive... XM_024451891.1 100% 100%
5 human 51526 OSER1 oxidative stress responsive... XM_011528854.3 86.9% 86.9% 75_76ins114
6 mouse 66680 Oser1 oxidative stress responsive... NM_025699.2 87.7% 86.6% (many diffs)
7 mouse 66680 Oser1 oxidative stress responsive... XM_006500025.1 87.7% 86.6% (many diffs)
8 mouse 66680 Oser1 oxidative stress responsive... XM_006500026.2 87.7% 86.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
942
ORF length:
876
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA ATCCGAAGCC AAGGATGGAG AGGAGGAGAG TCTACAGACT GCTTTCAAAA
121AATTAAGAGT GGATGCATCA GGGTCTGTAG CATCTCTGTC TGTTGGAGAA GGCACAGGTG
181TCAGAGCACC AGTCAGAACA GCAACAGATG ATACCAAACC TAAAACCACA TGTGCATCTA
241AAGACAGTTG GCACGGGTCT ACAAGGAAGT CTTCACGAGG AGCAGTGAGA ACTCAGCGTC
301GTCGACGTTC TAAGTCTCCT GTCCTTCATC CTCCAAAGTT TATACATTGC AGTACAATAG
361CGTCTTCTTC CAGCAGTCAA CTCAAGCACA AAAGCCAGAC TGACTCACCT GATGGCAGCA
421GTGGGCTGGG AATTTCATCC CCTAAAGAGT TCAGTGCAGG AGAAAGCTCT ACTTCTCTCG
481ATGCTAATCA CACAGGGGCA GTCGTTGAGC CTTTGAGAAC TTCTGTTCCA AGGCTCCCAT
541CAGAGAGTAA GAAGGAAGAC TCCTCTGACG CTACCCAAGT CCCCCAAGCA AGTCTCAAAG
601CCAGTGATCT CTCTGACTTT CAATCAGTTT CCAAGCTAAA CCAGGGCAAG CCATGCACAT
661GCATAGGCAA GGAATGCCAG TGTAAGAGAT GGCATGATAT GGAAGTGTAT TCCTTTTCAG
721GCCTGCAGAG TGTCCCTCCC TTGGCTCCAG AACGAAGATC CACACTTGAG GACTACTCTC
781AGTCGCTGCA CGCCAGAACT CTGTCTGGCT CTCCCCGATC CTGTTCTGAG CAAGCTCGAG
841TCTTCGTGGA TGATGTGACC ATTGAGGACC TGTCAGGCTA CATGGAGTAT TACTTGTATA
901TTCCCAAGAA AATGTCCCAC ATGGCAGAAA TGATGTACAC CTGCCCAACT TTCTTGTACA
961AAGTtggcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)

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