Construct: ORF ccsbBroadEn_03336

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014894.1_s300c1, BRDN0000395662
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM49B (51571)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51571 FAM49B family with sequence simila... NM_001256763.2 100% 100%
2 human 51571 FAM49B family with sequence simila... NM_001353242.2 100% 100%
3 human 51571 FAM49B family with sequence simila... NM_001353243.2 100% 100%
4 human 51571 FAM49B family with sequence simila... NM_001353244.2 100% 100%
5 human 51571 FAM49B family with sequence simila... NM_001353245.1 100% 100%
6 human 51571 FAM49B family with sequence simila... NM_001353246.1 100% 100%
7 human 51571 FAM49B family with sequence simila... NM_001353247.1 100% 100%
8 human 51571 FAM49B family with sequence simila... NM_001353248.2 100% 100%
9 human 51571 FAM49B family with sequence simila... NM_001353249.1 100% 100%
10 human 51571 FAM49B family with sequence simila... NM_001353250.1 100% 100%
11 human 51571 FAM49B family with sequence simila... NM_001353251.1 100% 100%
12 human 51571 FAM49B family with sequence simila... NM_001353252.1 100% 100%
13 human 51571 FAM49B family with sequence simila... NM_001353253.1 100% 100%
14 human 51571 FAM49B family with sequence simila... NM_001353254.2 100% 100%
15 human 51571 FAM49B family with sequence simila... NM_001353255.1 100% 100%
16 human 51571 FAM49B family with sequence simila... NM_001353256.2 100% 100%
17 human 51571 FAM49B family with sequence simila... NM_001353257.2 100% 100%
18 human 51571 FAM49B family with sequence simila... NM_001353258.2 100% 100%
19 human 51571 FAM49B family with sequence simila... NM_001353259.2 100% 100%
20 human 51571 FAM49B family with sequence simila... NM_001353260.2 100% 100%
21 human 51571 FAM49B family with sequence simila... NM_001353261.2 100% 100%
22 human 51571 FAM49B family with sequence simila... NM_001353262.2 100% 100%
23 human 51571 FAM49B family with sequence simila... NM_001353263.2 100% 100%
24 human 51571 FAM49B family with sequence simila... NM_001353264.2 100% 100%
25 human 51571 FAM49B family with sequence simila... NM_001353265.2 100% 100%
26 human 51571 FAM49B family with sequence simila... NM_001353266.2 100% 100%
27 human 51571 FAM49B family with sequence simila... NM_001353267.2 100% 100%
28 human 51571 FAM49B family with sequence simila... NM_001353268.2 100% 100%
29 human 51571 FAM49B family with sequence simila... NM_016623.5 100% 100%
30 human 51571 FAM49B family with sequence simila... XM_011517112.3 100% 100%
31 human 51571 FAM49B family with sequence simila... XM_011517121.3 100% 100%
32 human 51571 FAM49B family with sequence simila... XM_017013545.2 100% 100%
33 human 51571 FAM49B family with sequence simila... XM_017013548.1 100% 100%
34 human 51571 FAM49B family with sequence simila... XM_017013551.2 100% 100%
35 human 51571 FAM49B family with sequence simila... XM_024447180.1 100% 100%
36 human 51571 FAM49B family with sequence simila... NM_001353302.1 97% 96.9% (many diffs)
37 human 51571 FAM49B family with sequence simila... NM_001353303.1 97% 96.9% (many diffs)
38 human 51571 FAM49B family with sequence simila... NM_001353304.1 97% 96.9% (many diffs)
39 human 51571 FAM49B family with sequence simila... NM_001353305.1 97% 96.9% (many diffs)
40 human 51571 FAM49B family with sequence simila... NM_001353306.2 97% 96.9% (many diffs)
41 human 51571 FAM49B family with sequence simila... NM_001353307.2 97% 96.9% (many diffs)
42 human 51571 FAM49B family with sequence simila... NM_001353308.1 97% 96.9% (many diffs)
43 human 51571 FAM49B family with sequence simila... NM_001353309.1 97% 96.9% (many diffs)
44 human 51571 FAM49B family with sequence simila... NM_001353310.2 97% 96.9% (many diffs)
45 human 51571 FAM49B family with sequence simila... NM_001353311.2 97% 96.9% (many diffs)
46 human 51571 FAM49B family with sequence simila... NM_001353312.2 97% 96.9% (many diffs)
47 human 51571 FAM49B family with sequence simila... NM_001353313.2 97% 96.9% (many diffs)
48 human 51571 FAM49B family with sequence simila... NM_001353314.2 97% 96.9% (many diffs)
49 human 51571 FAM49B family with sequence simila... NM_001353315.2 97% 96.9% (many diffs)
50 human 51571 FAM49B family with sequence simila... XM_017013554.2 97% 96.9% (many diffs)
51 human 51571 FAM49B family with sequence simila... XM_017013557.2 97% 96.9% (many diffs)
52 human 51571 FAM49B family with sequence simila... NM_001353316.2 94.8% 89.8% (many diffs)
53 human 51571 FAM49B family with sequence simila... NM_001330612.2 54.9% 54.9% 0_1ins438
54 human 51571 FAM49B family with sequence simila... NM_001353269.1 54.9% 54.9% 0_1ins438
55 human 51571 FAM49B family with sequence simila... NM_001353270.1 54.9% 54.9% 0_1ins438
56 human 51571 FAM49B family with sequence simila... NM_001353271.1 54.9% 54.9% 0_1ins438
57 human 51571 FAM49B family with sequence simila... NM_001353272.1 54.9% 54.9% 0_1ins438
58 human 51571 FAM49B family with sequence simila... NM_001353273.1 54.9% 54.9% 0_1ins438
59 human 51571 FAM49B family with sequence simila... NM_001353274.1 54.9% 54.9% 0_1ins438
60 human 51571 FAM49B family with sequence simila... NM_001353275.1 54.9% 54.9% 0_1ins438
61 human 51571 FAM49B family with sequence simila... NM_001353276.2 54.9% 54.9% 0_1ins438
62 human 51571 FAM49B family with sequence simila... NM_001353277.1 54.9% 54.9% 0_1ins438
63 human 51571 FAM49B family with sequence simila... NM_001353278.1 54.9% 54.9% 0_1ins438
64 human 51571 FAM49B family with sequence simila... NM_001353279.1 54.9% 54.9% 0_1ins438
65 human 51571 FAM49B family with sequence simila... NM_001353280.1 54.9% 54.9% 0_1ins438
66 human 51571 FAM49B family with sequence simila... NM_001353281.1 54.9% 54.9% 0_1ins438
67 human 51571 FAM49B family with sequence simila... NM_001353282.2 54.9% 54.9% 0_1ins438
68 human 51571 FAM49B family with sequence simila... NM_001353283.2 54.9% 54.9% 0_1ins438
69 human 51571 FAM49B family with sequence simila... NM_001353284.2 54.9% 54.9% 0_1ins438
70 human 51571 FAM49B family with sequence simila... NM_001353285.2 54.9% 54.9% 0_1ins438
71 human 51571 FAM49B family with sequence simila... NM_001353286.2 54.9% 54.9% 0_1ins438
72 human 51571 FAM49B family with sequence simila... NM_001353287.2 54.9% 54.9% 0_1ins438
73 human 51571 FAM49B family with sequence simila... NM_001353288.2 54.9% 54.9% 0_1ins438
74 human 51571 FAM49B family with sequence simila... NM_001353289.2 54.9% 54.9% 0_1ins438
75 human 51571 FAM49B family with sequence simila... NM_001353290.2 54.9% 54.9% 0_1ins438
76 human 51571 FAM49B family with sequence simila... NM_001353291.2 54.9% 54.9% 0_1ins438
77 human 51571 FAM49B family with sequence simila... NM_001353292.2 54.9% 54.9% 0_1ins438
78 human 51571 FAM49B family with sequence simila... NM_001353293.2 54.9% 54.9% 0_1ins438
79 human 51571 FAM49B family with sequence simila... NM_001353294.2 54.9% 54.9% 0_1ins438
80 human 51571 FAM49B family with sequence simila... NM_001353295.2 54.9% 54.9% 0_1ins438
81 human 51571 FAM49B family with sequence simila... NM_001353296.2 54.9% 54.9% 0_1ins438
82 human 51571 FAM49B family with sequence simila... NM_001353297.2 54.9% 54.9% 0_1ins438
83 human 51571 FAM49B family with sequence simila... NM_001353298.2 54.9% 54.9% 0_1ins438
84 human 51571 FAM49B family with sequence simila... NM_001353299.2 54.9% 54.9% 0_1ins438
85 human 51571 FAM49B family with sequence simila... NM_001353300.2 54.9% 54.9% 0_1ins438
86 human 51571 FAM49B family with sequence simila... NM_001353301.2 54.9% 54.9% 0_1ins438
87 mouse 223601 Fam49b family with sequence simila... NM_144846.5 94.7% 99.6% (many diffs)
88 mouse 223601 Fam49b family with sequence simila... XM_006520761.2 94.7% 99.6% (many diffs)
89 mouse 223601 Fam49b family with sequence simila... XM_006520763.2 94.7% 99.6% (many diffs)
90 mouse 223601 Fam49b family with sequence simila... XM_006520764.3 94.7% 99.6% (many diffs)
91 mouse 223601 Fam49b family with sequence simila... XM_011245563.1 94.7% 99.6% (many diffs)
92 mouse 223601 Fam49b family with sequence simila... XM_011245565.2 94.7% 99.6% (many diffs)
93 mouse 223601 Fam49b family with sequence simila... XM_006520762.3 91.8% 96.6% (many diffs)
94 mouse 223601 Fam49b family with sequence simila... XM_006520765.2 91.8% 96.6% (many diffs)
95 mouse 223601 Fam49b family with sequence simila... XM_011245564.1 91.8% 96.6% (many diffs)
96 mouse 223601 Fam49b family with sequence simila... XM_017316550.1 91.8% 96.6% (many diffs)
97 mouse 223601 Fam49b family with sequence simila... XM_006520766.2 51.9% 54.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1038
ORF length:
972
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGG GAATCTTCTT AAAGTTTTGA CATGCACAGA CCTTGAGCAG GGGCCAAATT
121TTTTCCTTGA TTTTGAAAAT GCCCAGCCTA CAGAGTCTGA GAAGGAAATT TATAATCAGG
181TGAATGTAGT ATTAAAAGAT GCAGAAGGCA TCTTGGAGGA CTTGCAGTCA TACAGAGGAG
241CTGGCCACGA AATACGAGAG GCAATCCAGC ATCCAGCAGA TGAGAAGTTG CAAGAGAAGG
301CATGGGGTGC AGTTGTTCCA CTAGTAGGCA AATTAAAGAA ATTTTACGAA TTTTCTCAGA
361GGTTAGAAGC AGCATTAAGA GGTCTTCTGG GAGCCTTAAC AAGTACCCCA TATTCTCCCA
421CCCAGCATCT AGAGCGAGAG CAGGCTCTTG CTAAACAGTT TGCAGAAATT CTTCATTTCA
481CACTCCGGTT TGATGAACTC AAGATGACAA ATCCTGCCAT ACAGAATGAT TTCAGCTATT
541ATAGAAGAAC ATTGAGTCGT ATGAGGATTA ACAATGTACC GGCAGAAGGA GAAAATGAAG
601TAAATAATGA ATTGGCAAAT CGAATGTCTT TGTTTTATGC TGAGGCAACT CCAATGCTGA
661AAACCTTGAG TGATGCCACA ACAAAATTTG TATCAGAGAA TAAAAATTTA CCAATAGAAA
721ATACCACAGA TTGTTTAAGC ACAATGGCTA GTGTATGCAG AGTCATGCTG GAAACACCGG
781AATACAGAAG CAGATTTACA AATGAAGAGA CAGTGTCATT CTGCTTGAGG GTAATGGTGG
841GTGTCATAAT ACTCTATGAC CACGTACATC CAGTGGGAGC ATTTGCTAAA ACTTCCAAAA
901TTGATATGAA AGGTTGTATC AAAGTTCTTA AGGACCAACC TCCTAATAGT GTGGAAGGTC
961TTCTAAATGC TCTCAGGTAC ACAACAAAAC ATTTGAATGA TGAGACTACC TCCAAGCAAA
1021TTAAATCCAT GCTGCAATAC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
1081gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.