Construct: ORF ccsbBroadEn_03410

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010642.1_s300c1, BRDN0000387589
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DPM3 (54344)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54344 DPM3 dolichyl-phosphate mannosyl... NM_018973.3 100% 100%
2 human 54344 DPM3 dolichyl-phosphate mannosyl... NM_153741.2 75.4% 75.4% 0_1ins90
3 human 54344 DPM3 dolichyl-phosphate mannosyl... XM_017001498.1 75.4% 75.4% 0_1ins90
4 mouse 68563 Dpm3 dolichyl-phosphate mannosyl... NM_026767.4 64.2% 68% (many diffs)
5 mouse 68563 Dpm3 dolichyl-phosphate mannosyl... XM_006501983.1 64.2% 68% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
435
ORF length:
366
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCTCTCCGTG GGCGGGCTTC GGTTGAGTTT GGTCCGCTTT TCCTTTCTGC
121TCCTCAGGGG AGCATTGCTT CCTTCTCTCG CAGTGACCAT GACGAAATTA GCGCAGTGGC
181TTTGGGGACT AGCGATCCTG GGCTCCACCT GGGTGGCCCT GACCACGGGA GCCTTGGGCC
241TGGAGCTGCC CTTGTCCTGC CAGGAAGTCC TGTGGCCACT GCCCGCCTAC TTGCTGGTGT
301CCGCCGGCTG CTATGCCCTG GGCACTGTGG GCTATCGTGT GGCCACTTTT CATGACTGCG
361AGGACGCCGC ACGCGAGCTG CAGAGCCAGA TACAGGAGGC CCGAGCCGAC TTAGCCCGCA
421GGGGGCTGCG CTTCTTGCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
481tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)