Construct: ORF ccsbBroadEn_03445

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000789.1_s300c1, BRDN0000391450
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
UGT1A1 (54658)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 54658 UGT1A1 UDP glucuronosyltransferase... NM_000463.3 100% 100%
2 human 54579 UGT1A5 UDP glucuronosyltransferase... NM_019078.1 77.4% 73.1% (many diffs)
3 human 54578 UGT1A6 UDP glucuronosyltransferase... NM_205862.2 48.5% 48.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1668
ORF length:
1599
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCTGTGGAG TCCCAGGGCG GACGCCCACT TGTCCTGGGC CTGCTGCTGT
121GTGTGCTGGG CCCAGTGGTG TCCCATGCTG GGAAGATACT GTTGATCCCA GTGGATGGCA
181GCCACTGGCT GAGCATGCTT GGGGCCATCC AGCAGCTGCA GCAGAGGGGA CATGAAATAG
241TTGTCCTAGC ACCTGACGCC TCGTTGTACA TCAGAGACGG AGCATTTTAC ACCTTGAAGA
301CGTACCCTGT GCCATTCCAA AGGGAGGATG TGAAAGAGTC TTTTGTTAGT CTCGGGCATA
361ATGTTTTTGA GAATGATTCT TTCCTGCAGC GTGTGATCAA AACATACAAG AAAATAAAAA
421AGGACTCTGC TATGCTTTTG TCTGGCTGTT CCCACTTACT GCACAACAAG GAGCTCATGG
481CCTCCCTGGC AGAAAGCAGC TTTGATGTCA TGCTGACGGA CCCTTTCCTT CCTTGCAGCC
541CCATCGTGGC CCAGTACCTG TCTCTGCCCA CTGTATTCTT CTTGCATGCA CTGCCATGCA
601GCCTGGAATT TGAGGCTACC CAGTGCCCCA ACCCATTCTC CTACGTGCCC AGGCCTCTCT
661CCTCTCATTC AGATCACATG ACCTTCCTGC AGCGGGTGAA GAACATGCTC ATTGCCTTTT
721CACAGAACTT TCTGTGCGAC GTGGTTTATT CCCCGTATGC AACCCTTGCC TCAGAATTCC
781TTCAGAGAGA GGTGACTGTC CAGGACCTAT TGAGCTCTGC ATCTGTCTGG CTGTTTAGAA
841GTGACTTTGT GAAGGATTAC CCTAGGCCCA TCATGCCCAA TATGGTTTTT GTTGGTGGAA
901TCAACTGCCT TCACCAAAAT CCACTATCCC AGGAATTTGA AGCCTACATT AATGCTTCTG
961GAGAACATGG AATTGTGGTT TTCTCTTTGG GATCAATGGT CTCAGAAATT CCAGAGAAGA
1021AAGCTATGGC AATTGCTGAT GCTTTGGGCA AAATCCCTCA GACAGTCCTG TGGCGGTACA
1081CTGGAACCCG ACCATCGAAT CTTGCGAACA ACACGATACT TGTTAAGTGG CTACCCCAAA
1141ACGATCTGCT TGGTCACCCG ATGACCCGTG CCTTTATCAC CCATGCTGGT TCCCATGGTG
1201TTTATGAAAG CATATGCAAT GGCGTTCCCA TGGTGATGAT GCCCTTGTTT GGTGATCAGA
1261TGGACAATGC AAAGCGCATG GAGACTAAGG GAGCTGGAGT GACCCTGAAT GTTCTGGAAA
1321TGACTTCTGA AGATTTAGAA AATGCTCTAA AAGCAGTCAT CAATGACAAA AGTTACAAGG
1381AGAACATCAT GCGCCTCTCC AGCCTTCACA AGGACCGCCC GGTGGAGCCG CTGGACCTGG
1441CCGTGTTCTG GGTGGAGTTT GTGATGAGGC ACAAGGGCGC GCCACACCTG CGCCCCGCAG
1501CCCACGACCT CACCTGGTAC CAGTACCATT CCTTGGACGT GATTGGTTTC CTCTTGGCCG
1561TCGTGCTGAC AGTGGCCTTC ATCACCTTTA AATGTTGTGC TTATGGCTAC CGGAAATGCT
1621TGGGGAAAAA AGGGCGAGTT AAGAAAGCCC ACAAATCCAA GACCCATTTG CCAACTTTCT
1681TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

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