Construct: ORF ccsbBroadEn_03520

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001849.1_s300c1, BRDN0000388975
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM51 (55092)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55092 TMEM51 transmembrane protein 51 NM_001136216.2 100% 100%
2 human 55092 TMEM51 transmembrane protein 51 NM_001136217.1 100% 100%
3 human 55092 TMEM51 transmembrane protein 51 NM_001136218.2 100% 100%
4 human 55092 TMEM51 transmembrane protein 51 NM_018022.3 100% 100%
5 human 55092 TMEM51 transmembrane protein 51 XM_005245919.1 100% 100%
6 human 55092 TMEM51 transmembrane protein 51 XM_011541676.1 100% 100%
7 human 55092 TMEM51 transmembrane protein 51 XM_017001590.1 100% 100%
8 human 55092 TMEM51 transmembrane protein 51 NM_001319665.2 53.3% 45% 341_342insCAGC;405_406ins350
9 human 55092 TMEM51 transmembrane protein 51 NR_135082.2 30% 1_401del;555_556ins188;973_1710del
10 mouse 214359 Tmem51 transmembrane protein 51 NM_145402.3 82% 84.5% (many diffs)
11 mouse 214359 Tmem51 transmembrane protein 51 XM_006538713.3 82% 84.5% (many diffs)
12 mouse 214359 Tmem51 transmembrane protein 51 XM_006538714.2 82% 84.5% (many diffs)
13 mouse 214359 Tmem51 transmembrane protein 51 XM_006538715.3 82% 84.5% (many diffs)
14 mouse 214359 Tmem51 transmembrane protein 51 XM_006538717.3 82% 84.5% (many diffs)
15 mouse 214359 Tmem51 transmembrane protein 51 XM_011250227.1 82% 84.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
825
ORF length:
759
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAT GGCCCAGTCC AAGGCCAATG GCTCGCACTA TGCGCTGACC GCCATCGGCC
121TGGGGATGCT GGTCCTTGGG GTGATCATGG CCATGTGGAA CCTGGTACCC GGCTTCAGCG
181CGGCCGAGAA GCCAACAGCT CAGGGCAGCA ACAAGACCGA GGTGGGTGGC GGCATCCTCA
241AGAGCAAGAC CTTCTCTGTG GCCTACGTGC TGGTCGGGGC CGGGGTGATG CTGCTGCTGC
301TTTCTATCTG CCTGAGTATC AGGGATAAGA GGAAGCAGCG GCAGGGCGAG GACCTGGCCC
361ATGTCCAGCA CCCGACAGGC GCTGGGCCTC ACGCCCAGGA GGAAGACAGC CAGGAGGAAG
421AAGAGGAGGA TGAGGAGGCT GCCTCAAGGT ACTATGTTCC CAGCTACGAG GAAGTGATGA
481ACACAAACTA CTCAGAAGCA AGGGGAGAGG AGCAGAACCC GAGGTTGAGC ATCTCTCTCC
541CGTCCTATGA GTCACTGACG GGGCTCGACG AGACCACCCC CACATCCACC AGGGCTGACG
601TGGAGGCCAG CCCTGGGAAC CCCCCTGACA GGCAGAACTC TAAGTTGGCC AAACGACTGA
661AACCGCTGAA AGTTCGAAGG ATTAAATCTG AAAAGCTTCA CCTCAAAGAC TTTAGGATCA
721ACCTCCCAGA CAAAAACGTC CCTCCTCCCT CGATAGAGCC TTTGACTCCT CCACCGCAGT
781ATGATGAAGT CCAGGAGAAG GCCCCCGACA CCCGGCCGCC CGACTGCCCA ACTTTCTTGT
841ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)