Construct: ORF ccsbBroadEn_03842

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004612.1_s300c1, BRDN0000394177
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF317 (57693)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57693 ZNF317 zinc finger protein 317 NM_020933.5 100% 100%
2 human 57693 ZNF317 zinc finger protein 317 XM_024451626.1 100% 100%
3 human 57693 ZNF317 zinc finger protein 317 NM_001190791.2 94.6% 94.6% 288_289ins96
4 human 57693 ZNF317 zinc finger protein 317 XR_430146.4 44.9% 1_290del;2076_3970del
5 human 57693 ZNF317 zinc finger protein 317 NR_102435.2 42.4% 1_288del;577_722del;2220_4202del
6 mouse 244713 Zfp317 zinc finger protein 317 XM_017313370.1 51.6% 57.7% (many diffs)
7 mouse 244713 Zfp317 zinc finger protein 317 XM_017313371.1 51.6% 57.7% (many diffs)
8 mouse 244713 Zfp317 zinc finger protein 317 XM_017313372.1 51.6% 57.7% (many diffs)
9 mouse 244713 Zfp317 zinc finger protein 317 XM_017313373.1 51.6% 57.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1851
ORF length:
1785
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGCTCTGTCC CCCACATTTG CCACGTCCAC CCAGGATTCC ACCTGTCTCC
121AGGACTCAGA ATTTCCTGTT TCTTCAAAAG ACCATTCCTG TCCCCAGAAT TTGGACCTGT
181TCGTGTGCAG TGGTCTGGAG CCTCACACAC CCAGTGTTGG TTCCCAGGAA TCGGTGACTT
241TCCAAGATGT CGCTGTGGAC TTTACCGAGA AGGAGTGGCC CTTGCTGGAT TCTTCTCAGA
301GAAAACTGTA CAAAGATGTA ATGCTGGAGA ACTACAGCAA CCTCACTTCA CTGGGGTATC
361AGGTCGGCAA ACCCAGCCTC ATCTCACACT TGGAGCAGGA GGAGGAGCCG AGGACAGAGG
421AGAGGGGCGC TCACCAGGGC GCTTGTGCAG ATTGGGAGAC TCCATCTAAA ACCAAGTGGT
481CACTTCTTAT GGAAGATATT TTTGGGAAGG AAACGCCCAG TGGTGTGACG ATGGAAAGAG
541CCGGTCTTGG AGAGAAGTCC ACTGAATACG CTCACTTGTT CGAAGTCTTT GGCATGGACC
601CTCATCTCAC TCAGCCAATG GGAAGGCACG CTGGCAAGAG GCCCTATCAC CGCCGCGACT
661ATGGGGTAGC GTTCAAGGGC AGGCCGCACC TCACTCAGCA CATGAGCATG TACGACGGGA
721GAAAAATGCA TGAATGTCAT CAGTGCCAAA AAGCCTTCAC CACGAGCGCG TCCCTCACAC
781GGCACAGGAG AATCCACACC GGGGAGAAGC CTTACGAGTG CAGCGACTGC GGGAAAGCCT
841TCAACGACCC TTCAGCCCTT AGGAGCCACG CAAGAACTCA CCTCAAAGAG AAGCCCTTTG
901ACTGCAGTCA GTGTGGAAAT GCATTCCGGA CCCTCTCGGC CCTGAAAATC CACATGCGAG
961TTCACACTGG CGAGAGGCCT TACAAGTGTG ATCAGTGCGG GAAGGCTTAC GGCCGGAGCT
1021GCCACCTCAT CGCACACAAG AGAACGCACA CCGGAGAGAG GCCCTACGAG TGTCACGACT
1081GTGGGAAAGC TTTCCAGCAC CCCTCCCACC TCAAAGAGCA CGTGAGGAAT CACACGGGGG
1141AGAAGCCCTA CGCGTGCACG CAGTGCGGCA AAGCCTTCCG CTGGAAGTCC AACTTTAATT
1201TGCACAAGAA GAACCACATG GTGGAGAAGA CCTACGAATG TAAAGAATGC GGGAAATCCT
1261TTGGCGATCT CGTGTCCCGG AGGAAACACA TGAGGATTCA CATCGTCAAG AAACCCGTGG
1321AATGTCGGCA GTGCGGGAAG ACCTTCCGAA ACCAGTCCAT CCTTAAGACT CACATGAACT
1381CTCACACTGG AGAGAAACCA TACGGGTGCG ATCTCTGCGG GAAAGCTTTC AGCGCGAGTT
1441CAAACCTCAC CGCACACAGG AAGATACACA CGCAAGAGAG ACGCTACGAA TGCGCCGCCT
1501GCGGGAAAGT CTTCGGTGAC TATTTATCCC GGCGGAGGCA CATGAGCGTT CACCTTGTAA
1561AGAAACGAGT TGAGTGTAGG CAGTGTGGCA AGGCCTTCAG GAACCAGTCA ACGCTGAAGA
1621CGCACATGCG AAGCCACACG GGGGAGAAAC CGTACGAATG CGATCACTGT GGGAAGGCCT
1681TCAGCATAGG CTCCAACCTG AATGTGCACA GGCGGATCCA CACCGGGGAG AAGCCCTACG
1741AATGCCTTGT CTGCGGGAAA GCCTTCAGCG ACCACTCATC CCTCAGGAGC CACGTGAAAA
1801CTCACCGGGG AGAGAAGCTC TTTGTGTCAT CCGTGTGGAA AAGGCTCCAG TGCCCAACTT
1861TCTTGTACAA AGTtggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)