Construct: ORF ccsbBroadEn_03955

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014426.1_s300c1, BRDN0000398367
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ALDH8A1 (64577)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64577 ALDH8A1 aldehyde dehydrogenase 8 fa... NM_022568.4 100% 100%
2 human 64577 ALDH8A1 aldehyde dehydrogenase 8 fa... NM_001193480.2 89.7% 89.7% 441_442ins150
3 human 64577 ALDH8A1 aldehyde dehydrogenase 8 fa... NM_170771.3 88.9% 88.9% 849_850ins162
4 mouse 237320 Aldh8a1 aldehyde dehydrogenase 8 fa... NM_178713.4 85.4% 89.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1530
ORF length:
1461
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCTGGAACA AACGCACTTT TGATGCTGGA AAACTTCATA GATGGAAAAT
121TTTTACCTTG TAGCTCATAT ATAGATTCTT ACGACCCATC AACAGGGGAA GTGTATTGCA
181GAGTGCCAAA TAGTGGAAAA GACGAGATCG AAGCCGCGGT CAAGGCCGCC AGAGAAGCCT
241TTCCCAGCTG GTCATCCCGC AGCCCCCAGG AGCGCTCACG GGTCCTGAAC CAGGTGGCGG
301ATTTGCTGGA GCAGTCCCTG GAGGAGTTTG CCCAGGCCGA GTCTAAAGAC CAAGGGAAAA
361CCTTAGCACT GGCAAGAACC ATGGACATTC CCCGGTCTGT GCAGAACTTC AGGTTCTTCG
421CTTCCTCCAG CCTGCACCAC ACGTCAGAGT GCACGCAGAT GGACCACCTG GGCTGCATGC
481ACTACACGGT GCGGGCCCCG GTGGGAGTCG CTGGTCTGAT CAGCCCCTGG AATTTGCCAC
541TCTACTTGCT GACCTGGAAG ATAGCTCCAG CGATGGCTGC AGGGAACACT GTGATAGCCA
601AGCCCAGTGA GCTGACTTCA GTGACTGCGT GGATGTTGTG CAAACTCCTG GATAAAGCAG
661GTGTTCCACC AGGTGTGGTC AATATTGTGT TTGGAACCGG GCCCAGGGTG GGTGAGGCCC
721TGGTGTCCCA CCCAGAGGTG CCCCTGATCT CCTTCACCGG GAGCCAGCCC ACCGCTGAGC
781GGATCACCCA GCTGAGCGCT CCCCACTGCA AAAAGCTCTC CCTGGAGCTG GGGGGCAAGA
841ATCCTGCCAT CATCTTTGAG GACGCCAACC TGGATGAGTG CATTCCGGCA ACCGTCAGGT
901CCAGCTTTGC CAACCAGGGT GAAATCTGTC TCTGTACCAG CAGGATCTTT GTCCAGAAGA
961GCATCTATAG TGAATTTTTA AAGAGATTTG TAGAAGCTAC CAGAAAGTGG AAAGTCGGCA
1021TTCCCTCTGA TCCACTGGTG AGCATAGGTG CTCTGATAAG TAAAGCACAT TTGGAGAAAG
1081TCAGAAGTTA CGTCAAGAGA GCTCTTGCTG AAGGTGCCCA AATTTGGTGC GGTGAGGGAG
1141TGGATAAGTT GAGCCTCCCT GCCAGGAACC AGGCAGGCTA CTTTATGCTT CCCACGGTGA
1201TAACAGACAT TAAGGATGAA TCCTGCTGCA TGACGGAAGA GATATTTGGT CCAGTGACGT
1261GTGTCGTCCC CTTTGATAGT GAAGAGGAGG TGATTGAAAG AGCCAACAAC GTTAAGTATG
1321GGCTGGCGGC TACCGTGTGG TCCAGCAATG TGGGGCGCGT CCACCGGGTG GCTAAGAAGC
1381TGCAGTCTGG CTTGGTCTGG ACCAACTGCT GGCTCATCAG GGAGCTGAAC CTTCCTTTCG
1441GGGGGATGAA GAGTTCTGGA ATAGGTAGAG AGGGAGCCAA GGACTCTTAC GACTTCTTCA
1501CTGAGATCAA AACCATCACC GTTAAACACT TGCCAACTTT CTTGTACAAA GTtggcatta
1561taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)

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