Construct: ORF ccsbBroadEn_04327

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008046.1_s300c1, BRDN0000390913
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD27 (84079)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84079 ANKRD27 ankyrin repeat domain 27 NM_032139.3 100% 100%
2 human 84079 ANKRD27 ankyrin repeat domain 27 XM_006723412.2 100% 100%
3 human 84079 ANKRD27 ankyrin repeat domain 27 XM_017027349.1 81.3% 81.3% 0_1ins588
4 mouse 245886 Ankrd27 ankyrin repeat domain 27 (V... NM_178263.3 30.7% 32.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3216
ORF length:
3150
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC TCTGTATGAT GAAGACCTCC TGAAAAATCC TTTCTATCTG GCTCTGCAAA
121AGTGCCGCCC TGACTTGTGC AGCAAAGTGG CCCAAATCCA TGGCATTGTC TTAGTACCCT
181GCAAAGGAAG CCTGTCGAGC AGCATCCAGT CTACTTGTCA GTTTGAGTCC TACATTTTGA
241TACCTGTGGA AGAGCATTTT CAGACCTTAA ATGGAAAGGA TGTCTTTATT CAAGGGAACA
301GGATTAAATT AGGAGCTGGT TTTGCCTGTC TTCTCTCAGT GCCCATTCTC TTTGAAGAAA
361CTTTCTACAA TGAAAAAGAA GAGAGTTTCA GCATCCTGTG TATAGCCCAT CCTTTGGAAA
421AGAGAGAGAG TTCAGAAGAG CCTTTGGCAC CCTCAGATCC CTTTTCCCTG AAAACCATTG
481AAGATGTGAG AGAGTTCTTG GGAAGACACT CCGAGCGATT TGACAGGAAC ATCGCCTCTT
541TCCATCGAAC ATTCCGAGAA TGCGAGAGAA AGAGCCTCCG TCACCACATA GACTCAGCGA
601ATGCTCTCTA CACCAAATGC CTCCAGCAGC TTCTGAGGGA CTCTCACCTG AAAATGCTCG
661CCAAGCAGGA GGCCCAGATG AACCTGATGA AGCAGGCAGT GGAGATATAC GTCCATCATG
721AAATTTACAA CCTGATCTTT AAATACGTGG GGACCATGGA GGCAAGTGAG GATGCGGCCT
781TTAACAAAAT CACAAGAAGC CTTCAAGATC TTCAGCAGAA AGATATTGGT GTGAAACCGG
841AGTTCAGCTT TAACATACCT CGTGCCAAAA GAGAGCTGGC TCAGCTGAAC AAATGCACCT
901CCCCACAGCA GAAGCTTGTC TGCTTGCGAA AAGTGGTGCA GCTCATTACA CAGTCTCCAA
961GCCAGAGAGT GAACCTGGAG ACCATGTGTG CTGATGATCT GCTATCAGTC CTGTTATACT
1021TGCTTGTGAA AACGGAGATC CCTAATTGGA TGGCAAATTT GAGTTACATC AAAAACTTCA
1081GGTTTAGCAG CTTGGCAAAG GATGAACTGG GATACTGCCT GACCTCATTC GAAGCTGCCA
1141TTGAATATAT TCGGCAAGGA AGCCTCTCTG CTAAACCCCC TGAGTCTGAG GGATTTGGAG
1201ACAGGCTGTT CCTTAAGCAG AGAATGAGCT TACTCTCTCA GATGACTTCG TCTCCCACCG
1261ACTGCCTGTT TAAGCACATT GCATCAGGTA ACCAGAAAGA AGTGGAGAGA CTTCTGAGCC
1321AAGAGGACCA TGATAAAGAT ACCGTCCAAA AGATGTGTCA CCCTCTCTGC TTCTGCGATG
1381ACTGTGAGAA ACTCGTCTCT GGGAGGTTGA ATGATCCCTC AGTTGTCACT CCATTCTCCA
1441GAGACGACAG GGGGCACACC CCTCTCCATG TGGCTGCTGT CTGTGGGCAG GCATCCCTCA
1501TCGACCTCCT GGTTTCCAAG GGCGCCATGG TAAATGCCAC AGACTACCAT GGAGCCACTC
1561CGCTCCACCT GGCCTGTCAG AAGGGCTACC AGAGCGTGAC GCTGCTGCTG CTGCACTACA
1621AGGCCAGCGC GGAAGTGCAG GACAACAATG GGAATACGCC ACTCCACCTG GCCTGCACCT
1681ACGGCCACGA GGACTGTGTG AAGGCTCTGG TTTACTACGA CGTGGAGTCG TGCAGACTTG
1741ACATTGGCAA TGAGAAAGGA GACACCCCTC TACACATTGC TGCCCGCTGG GGCTACCAAG
1801GCGTCATAGA GACATTGCTG CAGAACGGAG CGTCCACCGA GATCCAGAAC AGACTGAAGG
1861AGACGCCCCT CAAGTGTGCA TTAAACTCAA AGATTCTGTC TGTAATGGAA GCCTATCACC
1921TGTCCTTCGA GAGGAGGCAG AAGTCGTCCG AGGCCCCTGT GCAGTCCCCG CAGCGCTCCG
1981TGGACTCCAT CAGCCAAGAG TCCTCCACTT CCAGCTTCTC CTCCATGTCA GCCAGCTCAA
2041GGCAGGAGGA GACCAAGAAG GACTACAGAG AGGTAGAAAA ACTTTTGAGA GCAGTTGCTG
2101ATGGAGATCT AGAAATGGTG CGTTACCTGT TGGAATGGAC AGAGGAGGAC CTGGAGGATG
2161CGGAGGACAC TGTCAGTGCA GCGGACCCCG AATTCTGTCA CCCGTTGTGC CAGTGCCCCA
2221AGTGTGCCCC AGCTCAGAAG AGGCTGGCGA AGGTTCCTGC CAGTGGGCTT GGTGTGAACG
2281TGACCAGCCA GGACGGCTCC TCCCCGCTGC ATGTCGCCGC CCTGCACGGC CGGGCGGACC
2341TCATCCCCCT CCTGCTGAAG CACGGGGCCA ACGCAGGTGC CAGGAACGCA GACCAAGCCG
2401TCCCGCTCCA CCTGGCCTGC CAGCAGGGCC ACTTTCAGGT GGTGAAGTGT CTGTTAGATT
2461CGAATGCAAA ACCCAATAAG AAGGACCTCA GTGGAAACAC GCCCCTCATT TACGCCTGCT
2521CCGGTGGCCA TCACGAGCTT GTGGCACTGC TGCTACAGCA CGGGGCCTCC ATTAACGCTT
2581CTAACAATAA GGGCAACACA GCGCTGCACG AGGCTGTGAT TGAAAAGCAC GTCTTCGTGG
2641TAGAGCTGCT TCTGCTCCAC GGAGCGTCAG TTCAGGTGCT GAACAAGCGG CAGCGCACGG
2701CTGTAGACTG TGCTGAACAG AATTCAAAAA TAATGGAATT GCTTCAGGTG GTACCAAGCT
2761GTGTTGCTTC ATTAGATGAT GTGGCTGAAA CTGACCGCAA GGAGTATGTC ACTGTTAAGA
2821TCAGGAAAAA ATGGAACTCA AAACTGTATG ATCTACCAGA TGAGCCTTTT ACAAGACAGT
2881TTTACTTTGT CCACTCAGCT GGTCAGTTTA AGGGAAAGAC TTCAAGGGAG ATTATGGCAA
2941GAGATAGAAG TGTCCCTAAT TTAACCGAAG GTTCTTTGCA TGAGCCAGGG AGGCAAAGTG
3001TCACACTGAG ACAGAATAAC CTGCCAGCTC AGAGTGGATC TCATGCTGCT GAGAAAGGCA
3061ACAGCGACTG GCCAGAGAGG CCTGGACTGA CACAGACTGG CCCTGGACAC AGACGGATGC
3121TGCGGAGACA CACGGTAGAG GATGCGGTCG TGTCCCAGGG CCCGGAGGCT GCTGGCCCCC
3181TCTCCACTCC CCAAGAGGTT AGTGCTTCCC GGTCCTACCC AACTTTCTTG TACAAAGTtg
3241gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

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